Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287425	5430405N12Rik	RIKEN cDNA 5430405N12 gene	14		71324
Mm.287425	Ptprg	protein tyrosine phosphatase, receptor type, G	14	14 2.0 cM	19270
Gene Ontology	carbonate dehydratase activity | extracellular space | hydrolase activity | integral to membrane | one-carbon compound metabolism | phosphoprotein phosphatase activity | plasma membrane | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity | transmembrane receptor protein tyrosine phosphatase signaling pathway | zinc ion binding
Human Homolog	PTPRG[protein tyrosine phosphatase, receptor type, G]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GTAAAAAAAA (28) 55.5 0.0555 P8 Cb GC TGAACATCTC (3) 3.3 0.0033 P8 Cb GC ACCTTTTCAT (2) 1.6 0.0016 Cb medulloblastoma GTAAAAAAAA (28) 129.5 0.1295 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma AGGAGGAAGA (14) 2.3 0.0023 P8 GC+1d culture GTAAAAAAAA (28) 74.2 0.0742 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TGAACATCTC (3) 2.3 0.0023 P8 GC+1d culture ACCTGGCAGA (3) 1.1 0.0011 P8 GC+SHH+1d culture GTAAAAAAAA (28) 132.3 0.1323 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ACCTGGCAGA (3) 2.3 0.0023 P8 GC+SHH+1d culture TGAACATCTC (3) 2.3 0.0023 P8 GC+SHH+1d culture CTGCAGCAGA (6) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GTAAAAAAAA (28) 7 0.007 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GTAAAAAAAA (28) 34.6 0.0346 E15 cortex AGGAGGAAGA (14) 4.9 0.0049 E15 cortex TGAACATCTC (3) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GTAAAAAAAA (28) 36.4 0.0364 P1 cortex ACCTTTTCAT (2) 4.5 0.0045 P1 cortex AGGAGGAAGA (14) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GTAAAAAAAA (28) 99.6 0.0996 Hypothalamus ACCTGGCAGA (3) 7.2 0.0072 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GTAAAAAAAA (28) 41.3 0.0413 E12.5 retina ACCTGGCAGA (3) 5.6 0.0056 E12.5 retina TGAACATCTC (3) 3.8 0.0038 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GTAAAAAAAA (28) 82 0.082 E14.5 retina TGAACATCTC (3) 3.6 0.0036 E14.5 retina ACCTGGCAGA (3) 1.8 0.0018 E14.5 retina ACCTTTTCAT (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GTAAAAAAAA (28) 68.8 0.0688 E16.5 retina ACCTGGCAGA (3) 5.4 0.0054 E16.5 retina ACCTTTTCAT (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GTAAAAAAAA (28) 189.2 0.1892 E18.5 retina TGAACATCTC (3) 7.3 0.0073 E18.5 retina ACCTGGCAGA (3) 1.8 0.0018 E18.5 retina ACCTTTTCAT (2) 1.8 0.0018 E18.5 retina AGGAGGAAGA (14) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GTAAAAAAAA (28) 51 0.051 P0.5 retina TGAACATCTC (3) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GTAAAAAAAA (28) 103.8 0.1038 P2.5 retina TGAACATCTC (3) 3.5 0.0035 P2.5 retina GCGGCCGTAC (3) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GTAAAAAAAA (28) 142.7 0.1427 P4.5 retina TGAACATCTC (3) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GTAAAAAAAA (28) 66.7 0.0667 P6.5 retina AGGAGGAAGA (14) 1.7 0.0017 P6.5 retina CTGCAGCAGA (6) 1.7 0.0017 P6.5 retina TGAACATCTC (3) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GTAAAAAAAA (28) 26 0.026 P10.5 crx- retina ACCTTTTCAT (2) 5.6 0.0056 P10.5 crx- retina CTGCAGCAGA (6) 3.7 0.0037 P10.5 crx- retina AGGAGGAAGA (14) 1.9 0.0019 P10.5 crx- retina GCGGCCGTAC (3) 1.9 0.0019 P10.5 crx- retina TGAACATCTC (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTAAAAAAAA (28) 55.8 0.0558 P10.5 crx+ retina ACCTGGCAGA (3) 3.8 0.0038 P10.5 crx+ retina ACCTTTTCAT (2) 1.9 0.0019 P10.5 crx+ retina GCGGCCGTAC (3) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GTAAAAAAAA (28) 22.2 0.0222 Adult retinal CTGCAGCAGA (6) 7.4 0.0074 Adult retinal ACCTTTTCAT (2) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTAAAAAAAA (28) 24.9 0.0249 ONL AGGAGGAAGA (14) 1.9 0.0019 ONL CTGCAGCAGA (6) 1.9 0.0019