Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28747	Ctdspl	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	9		69274
Gene Ontology	nucleus
Human Homolog	CTDSPL[CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGGGTTTG (2) 9.8 0.0098 P8 Cb GC TTGGGATGTT (3) 3.3 0.0033 Cb medulloblastoma TTGGGATGTT (3) 6.9 0.0069 Cb medulloblastoma CCAGGGTTTG (2) 2.3 0.0023 Cb medulloblastoma TTGGGATGTG 2.3 0.0023 P8 GC+1d culture TTGGGATGTG 5.7 0.0057 P8 GC+1d culture CCAGGGTTTG (2) 2.3 0.0023 P8 GC+1d culture TTGGGATGTT (3) 2.3 0.0023 P8 GC+SHH+1d culture CCAGGGTTTG (2) 5.9 0.0059 P8 GC+SHH+1d culture CTGGTGTGGC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGGGATGTG 1.2 0.0012 P8 GC+SHH+1d culture TTGGGATGTT (3) 1.2 0.0012 3T3 fibroblasts CCAGGGTTTG (2) 10.5 0.0105 3T3 fibroblasts CCTACCTGGT (2) 3.5 0.0035 E15 cortex CCAGGGTTTG (2) 9.9 0.0099 E15 cortex TTGGGATGTT (3) 9.9 0.0099 P1 cortex TTGGGATGTT (3) 22.7 0.0227 Hypothalamus TTGGGATGTT (3) 19.9 0.0199 Hypothalamus CCAGGGTTTG (2) 7.2 0.0072 Hypothalamus CTGGTGTGGC (2) 1.8 0.0018 Hypothalamus TTGGGATGTG 1.8 0.0018 E12.5 retina CCAGGGTTTG (2) 9.4 0.0094 E12.5 retina TTGGGATGTG 5.6 0.0056 E14.5 retina TTGGGATGTG 9.1 0.0091 E14.5 retina CCAGGGTTTG (2) 3.6 0.0036 E14.5 retina TTGGGATGTT (3) 3.6 0.0036 E14.5 retina CCTACCTGGT (2) 1.8 0.0018 E16.5 retina CCAGGGTTTG (2) 9.1 0.0091 E16.5 retina TTGGGATGTT (3) 5.4 0.0054 E16.5 retina TTGGGATGTG 3.6 0.0036 E18.5 retina CCAGGGTTTG (2) 12.7 0.0127 E18.5 retina TTGGGATGTT (3) 5.5 0.0055 E18.5 retina TTGGGATGTG 1.8 0.0018 P0.5 retina CCAGGGTTTG (2) 9.8 0.0098 P0.5 retina TTGGGATGTG 3.9 0.0039 P2.5 retina TTGGGATGTT (3) 12.3 0.0123 P2.5 retina CCAGGGTTTG (2) 10.6 0.0106 P2.5 retina TTGGGATGTG 1.8 0.0018 P4.5 retina TTGGGATGTT (3) 11.9 0.0119 P4.5 retina CCAGGGTTTG (2) 4 0.004 P4.5 retina TTGGGATGTG 2 0.002 P6.5 retina TTGGGATGTT (3) 10 0.01 P6.5 retina CCAGGGTTTG (2) 3.3 0.0033 P6.5 retina CCTACCTGGT (2) 1.7 0.0017 P6.5 retina TTGGGATGTG 1.7 0.0017 P10.5 crx- retina CCAGGGTTTG (2) 16.7 0.0167 P10.5 crx- retina TTGGGATGTT (3) 7.4 0.0074 P10.5 crx- retina TTGGGATGTG 3.7 0.0037 P10.5 crx- retina CTGGTGTGGC (2) 1.9 0.0019 P10.5 crx+ retina CCAGGGTTTG (2) 15.4 0.0154 P10.5 crx+ retina TTGGGATGTT (3) 3.8 0.0038 Adult retinal TTGGGATGTT (3) 18.5 0.0185 Adult retinal CCAGGGTTTG (2) 5.6 0.0056 ONL TTGGGATGTT (3) 3.8 0.0038 ONL CCAGGGTTTG (2) 1.9 0.0019