Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28756	Slc40a1	solute carrier family 40 (iron-regulated transporter), member 1	1		53945
Gene Ontology	binding | integral to membrane | iron ion transport | iron ion transporter activity | mitochondrial inner membrane | synaptic vesicle | transport
Human Homolog	SLC40A1[solute carrier family 40 (iron-regulated transporter), member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGTGAACA (5) 6.5 0.0065 P8 Cb GC ACCAAGGCAA (29) 1.6 0.0016 P8 Cb GC GGAAAAATAG (6) 1.6 0.0016 Cb medulloblastoma GGAAAAATAG (6) 13.9 0.0139 Cb medulloblastoma AGAGAGAGCG 4.6 0.0046 Cb medulloblastoma AATGTGAACA (5) 2.3 0.0023 Cb medulloblastoma ACCAAGGCAA (29) 2.3 0.0023 Cb medulloblastoma CATTGCTGTG (5) 2.3 0.0023 P8 GC+1d culture AATGTGAACA (5) 17.1 0.0171 P8 GC+1d culture ACCAAGGCAA (29) 3.4 0.0034 P8 GC+1d culture ACTTGTATTT (3) 1.1 0.0011 P8 GC+SHH+1d culture AATGTGAACA (5) 7 0.007 P8 GC+SHH+1d culture AGAGAGAGCG 1.2 0.0012 P8 GC+SHH+1d culture CATTGCTGTG (5) 1.2 0.0012 P8 GC+SHH+1d culture GGAAAAATAG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGGTACTGG (10) 1.2 0.0012 P8 GC+SHH+1d culture TTGGTACTGG (6) 1.2 0.0012 E15 cortex ACCAAGGCAA (29) 4.9 0.0049 Hypothalamus GGAAAAATAG (6) 10.9 0.0109 Hypothalamus AATGTGAACA (5) 1.8 0.0018 Hypothalamus ACTTGTATTT (3) 1.8 0.0018 Hypothalamus TGGGTACTGG (10) 1.8 0.0018 E12.5 retina GGAAAAATAG (6) 11.3 0.0113 E12.5 retina AATGTGAACA (5) 1.9 0.0019 E12.5 retina ACTTGTATTT (3) 1.9 0.0019 E14.5 retina GGAAAAATAG (6) 16.4 0.0164 E14.5 retina ACCAAGGCAA (29) 14.6 0.0146 E14.5 retina ACTTGTATTT (3) 1.8 0.0018 E14.5 retina TGGGTACTGG (10) 1.8 0.0018 E16.5 retina GGAAAAATAG (6) 19.9 0.0199 E16.5 retina ACTTGTATTT (3) 1.8 0.0018 E16.5 retina TGGGTACTGG (10) 1.8 0.0018 E18.5 retina GGAAAAATAG (6) 20 0.02 E18.5 retina ACCAAGGCAA (29) 1.8 0.0018 P0.5 retina ACCAAGGCAA (29) 3.9 0.0039 P0.5 retina GGAAAAATAG (6) 3.9 0.0039 P0.5 retina ACTTGTATTT (3) 2 0.002 P0.5 retina TGGGTACTGG (10) 2 0.002 P2.5 retina GGAAAAATAG (6) 7 0.007 P2.5 retina ACCAAGGCAA (29) 1.8 0.0018 P4.5 retina GGAAAAATAG (6) 11.9 0.0119 P4.5 retina TGGGTACTGG (10) 2 0.002 P6.5 retina GGAAAAATAG (6) 6.7 0.0067 P6.5 retina ACCAAGGCAA (29) 1.7 0.0017 P6.5 retina CATTGCTGTG (5) 1.7 0.0017 P6.5 retina TGGGTACTGG (10) 1.7 0.0017 P10.5 crx- retina GGAAAAATAG (6) 29.7 0.0297 P10.5 crx- retina TGGGTACTGG (10) 3.7 0.0037 P10.5 crx- retina CATTGCTGTG (5) 1.9 0.0019 P10.5 crx+ retina GGAAAAATAG (6) 19.2 0.0192 P10.5 crx+ retina ACCAAGGCAA (29) 1.9 0.0019 Adult retinal GGAAAAATAG (6) 3.7 0.0037 Adult retinal ACCAAGGCAA (29) 1.9 0.0019 Adult retinal TTGGTACTGG (6) 1.9 0.0019 ONL ACCAAGGCAA (29) 9.6 0.0096 ONL ACTTGTATTT (3) 1.9 0.0019 ONL GGAAAAATAG (6) 1.9 0.0019 ONL TTGGTACTGG (6) 1.9 0.0019