Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28777	Pls3	plastin 3 (T-isoform)	X		102866
Gene Ontology	actin binding | calcium ion binding
Human Homolog	PLS3[plastin 3 (T isoform)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACTTTTTG (2) ATAAAAAAAA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 37.5 0.0375 Cb medulloblastoma ACACTTTTTG (2) ATAAAAAAAA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 60 0.06 P8 GC+1d culture ACACTTTTGA ACACTTTTTG (2) ATAAAAAAAA (2) CCACTTTTGA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 67.4 0.0674 P8 GC+SHH+1d culture ACACTTTTTG (2) ATAAAAAAAA (2) CCACTTTTGA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 63.4 0.0634 E15 cortex ACACTTTTTG (2) GATATTTTTT (2) TTCAAGAAGA 29.6 0.0296 P1 cortex ACACTTTTTG (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 36.4 0.0364 Hypothalamus ACACTTTTTG (2) ATAAAAAAAA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 23.4 0.0234 E12.5 retina ACACTTTTTG (2) ATAAAAAAAA (2) GAATTTGGCT (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 32 0.032 E14.5 retina ACACTTTTGA ATAAAAAAAA (2) CCACTTTTGA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 41.8 0.0418 E16.5 retina ACACTTTTTG (2) ATAAAAAAAA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 28.9 0.0289 E18.5 retina ACACTTTTTG (2) ATAAAAAAAA (2) CACTTTTGCA (3) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 54.4 0.0544 P0.5 retina ACACTTTTTG (2) ATAAAAAAAA (2) CCACTTTTGA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 23.6 0.0236 P2.5 retina ACACTTTTGA ACACTTTTTG (2) ATAAAAAAAA (2) CACTTTTGCA (3) CCACTTTTGA (2) GAATTTGGCT (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 52.9 0.0529 P4.5 retina ACACTTTTTG (2) ATAAAAAAAA (2) CCACTTTTGA (2) GATATTTTTT (2) TTCAAGAAGA 51.5 0.0515 P6.5 retina ATAAAAAAAA (2) CACTTTTGCA (3) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 26.7 0.0267 P10.5 crx- retina ACACTTTTTG (2) ATAAAAAAAA (2) CCACTTTTGA (2) TAAACTGGGT TTCAAGAAGA 20.5 0.0205 P10.5 crx+ retina ACACTTTTTG (2) ATAAAAAAAA (2) CACTTTTGCA (3) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 30.7 0.0307 Adult retinal ACACTTTTGA CCACTTTTGA (2) GATATTTTTT (2) TAAACTGGGT 18.7 0.0187 ONL ATAAAAAAAA (2) CCACTTTTGA (2) GATATTTTTT (2) TAAACTGGGT TTCAAGAAGA 15.3 0.0153