Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287837	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4	16		50505
Gene Ontology	DNA binding | DNA metabolism | DNA repair | endodeoxyribonuclease activity | endonuclease activity | hydrolase activity | magnesium ion binding | nuclease activity | nucleic acid binding | nucleotide excision repair complex | nucleotide-excision repair | nucleus
Human Homolog	ERCC4[excision repair cross-complementing rodent repair deficiency, complementation group 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TGGTGTTTGG (4) 4.9 0.0049 P8 Cb GC GTCCTAACAC 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TGGTGTTTGG (4) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TGGTGTTTGG (4) 2.3 0.0023 P8 GC+1d culture GTCCTAACAC 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TGGTGTTTGG (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts TGGTGTTTGG (4) 14 0.014 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TGGTGTTTGG (4) 9.9 0.0099 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TGGTGTTTGG (4) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TGGTGTTTGG (4) 5.4 0.0054 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TGGTGTCTGG 1.9 0.0019 E12.5 retina TGGTGTTTGG (4) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TGGTGTTTGG (4) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TGGTGTTTGG (4) 5.9 0.0059 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TGGTGTTTGG (4) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TGGTGTTTGG (4) 4 0.004 P4.5 retina GTCCTAACAC 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TGGTGTCTGG 1.7 0.0017 P6.5 retina TGGTGTTTGG (4) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 Adult retinal CCTTTAATCC (355) 129.6 0.1296 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TGGTGTCTGG 3.8 0.0038 ONL TGGTGTTTGG (4) 1.9 0.0019