Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287892	Clpp	caseinolytic protease, ATP-dependent, proteolytic subunit homolog (E. coli)	17	17 D (17 34.0 cM)	53895
Gene Ontology	endopeptidase Clp activity | hydrolase activity | misfolded or incompletely synthesized protein catabolism | mitochondrion | peptidase activity | proteolysis and peptidolysis | serine-type endopeptidase activity
Human Homolog	CLPP[ClpP caseinolytic protease, ATP-dependent, proteolytic subunit homolog (E. coli)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGCCCAAG (6) 3.3 0.0033 P8 Cb GC AAGCTGAAAA (5) 1.6 0.0016 P8 Cb GC GCGGGGAGAA (4) 1.6 0.0016 P8 Cb GC GGCTCCCTGC (3) 1.6 0.0016 Cb medulloblastoma GGCTCCCTGC (3) 30.1 0.0301 Cb medulloblastoma GAGGCCCAAG (6) 2.3 0.0023 P8 GC+1d culture GGCTCCCTGC (3) 16 0.016 P8 GC+1d culture GAGGCCCAAG (6) 4.6 0.0046 P8 GC+1d culture GGCCCCGATT (2) 1.1 0.0011 P8 GC+1d culture TAGCTGACAG (2) 1.1 0.0011 P8 GC+SHH+1d culture GGCTCCCTGC (3) 8.2 0.0082 P8 GC+SHH+1d culture GAGGCCCAAG (6) 3.5 0.0035 P8 GC+SHH+1d culture TAGCGGTCCC (2) 1.2 0.0012 3T3 fibroblasts GAGGCCCAAG (6) 7 0.007 E15 cortex GGCTCCCTGC (3) 14.8 0.0148 E15 cortex GAGGCCCAAG (6) 4.9 0.0049 E15 cortex GCGGGGAGAA (4) 4.9 0.0049 E15 cortex GGCCCCGATT (2) 4.9 0.0049 P1 cortex GGCTCCCTGC (3) 13.6 0.0136 Hypothalamus GGCTCCCTGC (3) 5.4 0.0054 Hypothalamus GAGGCCCAAG (6) 1.8 0.0018 E12.5 retina GAGGCCCAAG (6) 1.9 0.0019 E14.5 retina GAGGCCCAAG (6) 3.6 0.0036 E14.5 retina TAGCTGACAG (2) 3.6 0.0036 E14.5 retina AAGCTGAAAA (5) 1.8 0.0018 E14.5 retina GGCTCCCTGC (3) 1.8 0.0018 E14.5 retina TAGCGGTCCC (2) 1.8 0.0018 E16.5 retina GGCCCCGATT (2) 1.8 0.0018 E18.5 retina GGCTCCCTGC (3) 3.6 0.0036 E18.5 retina CAGCCTTGTG 1.8 0.0018 P0.5 retina GAGGCCCAAG (6) 5.9 0.0059 P0.5 retina GGCTCCCTGC (3) 2 0.002 P2.5 retina GGCTCCCTGC (3) 10.6 0.0106 P2.5 retina GAGGCCCAAG (6) 1.8 0.0018 P4.5 retina GGCTCCCTGC (3) 31.7 0.0317 P4.5 retina GAGGCCCAAG (6) 2 0.002 P6.5 retina GGCTCCCTGC (3) 15 0.015 P6.5 retina GAGGCCCAAG (6) 10 0.01 P6.5 retina CAGCCTTGTG 1.7 0.0017 P10.5 crx- retina GAGGCCCCAA (4) 5.6 0.0056 P10.5 crx- retina GGCTCCCTGC (3) 5.6 0.0056 P10.5 crx- retina CAGCCTTGTG 3.7 0.0037 P10.5 crx- retina GAGGCCCAAG (6) 3.7 0.0037 P10.5 crx- retina GGCCCCGATT (2) 1.9 0.0019 P10.5 crx+ retina GGCTCCCTGC (3) 21.1 0.0211 P10.5 crx+ retina GAGGCCCAAG (6) 11.5 0.0115 P10.5 crx+ retina AAGCTGAAAA (5) 1.9 0.0019 P10.5 crx+ retina GAGGCCCCAA (4) 1.9 0.0019 P10.5 crx+ retina GCGGGGAGAA (4) 1.9 0.0019 Adult retinal GGCTCCCTGC (3) 7.4 0.0074 Adult retinal GAGGCCCAAG (6) 5.6 0.0056 Adult retinal TAGCTGACAG (2) 3.7 0.0037 Adult retinal TAGCGGTCCC (2) 1.9 0.0019 ONL GAGGCCCAAG (6) 5.7 0.0057 ONL AAGCTGAAAA (5) 1.9 0.0019 ONL GGCTCCCTGC (3) 1.9 0.0019