Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28811
DXErtd793
DNA segment, Chr X, ERATO Doi 793
X
X 1.5 cM
52147
Mm.28811
2310068J16Rik
RIKEN cDNA 2310068J16 gene
15
70281
Mm.28811
D330037H05Rik
RIKEN cDNA D330037H05 gene
15
207214
Human Homolog
LOC113251[c-Mpl binding protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CATAAACTGT
(
4
)
3.3
0.0033
P8 Cb GC
TGTAATAAGA
(
11
)
3.3
0.0033
P8 Cb GC
TTGGGGGAGT (
5
)
3.3
0.0033
P8 Cb GC
TAACTTTGCC
(
5
)
1.6
0.0016
Cb medulloblastoma
CATAAACTGT
(
4
)
2.3
0.0023
P8 GC+1d culture
TTGGGGGAGT (
5
)
3.4
0.0034
P8 GC+1d culture
GTAGTAAATG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TAACTTTGCC
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTAATAAGA
(
11
)
2.3
0.0023
P8 GC+SHH+1d culture
TTGGGGGAGT (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CATAAACTGT
(
4
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
AAGAGAGCAG (
7
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
TGTAATAAGA
(
11
)
9.1
0.0091
Hypothalamus
CATAAACTGT
(
4
)
3.6
0.0036
E12.5 retina
CATAAACTGT
(
4
)
5.6
0.0056
E12.5 retina
TGTAATAAGA
(
11
)
5.6
0.0056
E12.5 retina
TTGGGGGAGT (
5
)
3.8
0.0038
E12.5 retina
GTAGTAAATG
(
3
)
1.9
0.0019
E14.5 retina
TAACTTTGCC
(
5
)
1.8
0.0018
E14.5 retina
TTGGGGGAGT (
5
)
1.8
0.0018
E16.5 retina
AAGAGAGCAG (
7
)
1.8
0.0018
E16.5 retina
GTAGTAAATG
(
3
)
1.8
0.0018
E16.5 retina
TAACTTTGCC
(
5
)
1.8
0.0018
E16.5 retina
TTGGGGGAGT (
5
)
1.8
0.0018
E18.5 retina
CATAAACTGT
(
4
)
1.8
0.0018
E18.5 retina
TTGGGGGAGT (
5
)
1.8
0.0018
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
TTGGGGGAGT (
5
)
3.9
0.0039
P2.5 retina
TGTAATAAGA
(
11
)
5.3
0.0053
P2.5 retina
TTGGGGGAGT (
5
)
3.5
0.0035
P2.5 retina
AAGAGAGCAG (
7
)
1.8
0.0018
P2.5 retina
CATAAACTGT
(
4
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TAACTTTGCC
(
5
)
1.8
0.0018
P4.5 retina
CATAAACTGT
(
4
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TAACTTTGCC
(
5
)
2
0.002
P4.5 retina
TTGGGGGAGT (
5
)
2
0.002
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
TGTAATAAGA
(
11
)
3.3
0.0033
P6.5 retina
TAACTTTGCC
(
5
)
1.7
0.0017
P6.5 retina
TTGGGGGAGT (
5
)
1.7
0.0017
P10.5 crx- retina
CATAAACTGT
(
4
)
1.9
0.0019
P10.5 crx+ retina
CATAAACTGT
(
4
)
3.8
0.0038
P10.5 crx+ retina
TAACTTTGCC
(
5
)
1.9
0.0019
Adult retinal
TTGGGGGAGT (
5
)
3.7
0.0037
Adult retinal
CATAAACTGT
(
4
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
CATAAACTGT
(
4
)
3.8
0.0038
