Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28825	Pou6f1	POU domain, class 6, transcription factor 1	15	15 56.6 cM	19009
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	POU6F1[POU domain, class 6, transcription factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGCACCTT (2) 1.6 0.0016 P8 Cb GC AGACCACTCT (2) 1.6 0.0016 P8 Cb GC TGTTCTCATT (8) 1.6 0.0016 P8 Cb GC TTTACAGGCT (2) 1.6 0.0016 Cb medulloblastoma TTTACAGGCT (2) 2.3 0.0023 P8 GC+1d culture TTTACAGGCT (2) 4.6 0.0046 P8 GC+1d culture AAAGCACCTT (2) 2.3 0.0023 P8 GC+1d culture TGTTCTCATT (8) 2.3 0.0023 P8 GC+SHH+1d culture TTTACAGGCT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAAGCACCTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTTCTCATT (8) 1.2 0.0012 E15 cortex AAAGCACCTT (2) 4.9 0.0049 Hypothalamus AGACCACTCT (2) 1.8 0.0018 Hypothalamus TGTTCTCATT (8) 1.8 0.0018 E12.5 retina TGTTCTCATT (8) 5.6 0.0056 E12.5 retina TTTACAGGCT (2) 1.9 0.0019 E14.5 retina AGACCACTCT (2) 1.8 0.0018 E16.5 retina TGTTCTCATT (8) 5.4 0.0054 P0.5 retina AGACCACTCT (2) 3.9 0.0039 P0.5 retina TTTACAGGCT (2) 3.9 0.0039 P0.5 retina TGTTCTCATT (8) 2 0.002 P2.5 retina TGTTCTCATT (8) 8.8 0.0088 P4.5 retina TGTTCTCATT (8) 4 0.004 P6.5 retina AAAGCACCTT (2) 1.7 0.0017 P6.5 retina TTTACAGGCT (2) 1.7 0.0017 P10.5 crx- retina AGACCACTCT (2) 5.6 0.0056 P10.5 crx- retina AAAGCACCTT (2) 1.9 0.0019 Adult retinal AGACCACTCT (2) 7.4 0.0074 Adult retinal TTTACAGGCT (2) 3.7 0.0037 Adult retinal AAAGCACCTT (2) 1.9 0.0019 ONL TTTACAGGCT (2) 1.9 0.0019