Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288451	Hnrpk	heterogeneous nuclear ribonucleoprotein K	13		15387
Gene Ontology	DNA binding | nucleic acid binding | nucleoplasm | nucleus | protein binding | ribonucleoprotein complex | RNA binding | RNA processing | viral nucleocapsid
Human Homolog	HNRPK[heterogeneous nuclear ribonucleoprotein K]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 339 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATATGTGAT AATCTGGAGC AGGGAGAGGG AGGGGAAAAA ATGTCTAAAA ATGTTAAAAA ATGTTAGTTA ATTCAACACA (2) CAAAAACTAA CCCTCCCCCC CCTTCCCTTC GAAGTTTTAT GAGCCCATCA GCCAAACTTA GCCCCCTTCC GGGGGAATTT TAAAGTTTGT TAAGAAGGAG TCCCTGGCAT 177.6 0.1776 Cb medulloblastoma AATCTGGAGC ATGTAAAAAA (3) ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC CCTTCCCTTC GAAGTTTTAT GAGCCCATCA GCCAAACTTA GCCCCCTTCC GGGGGAATTT TAAAGTTTGT TAAGAAGGAG TAATTATTTG (5) TCCCTGGCAT TGGGGAGGAG TTAATTTATT (2) 94.4 0.0944 P8 GC+1d culture AAGGGGAAAG (4) AATATGTGAT AATCTGGAGC AGGGAGAGGG AGGGTGATGC (3) ATGTTAAAAA ATGTTAGTTA ATTCAACACA (2) CAAAAACTAA CCCTCCCCCC CCTTCCCTTC CTGGAGCAGT (2) GAGCCCATCA GCCAAACTTA GCCCCCTTCC GCCCTGGCAT (2) GGGGGAATTT GTGCCTACAA TAAAGTTTGT TAAGAAGGAG TCCCTGGCAT TTCCTGGCAT (2) 137.8 0.1378 P8 GC+SHH+1d culture AAGGGGAAAG (4) AATATGTGAT AATCTGGAGC AGGGGAAGAG ATGTAAAAAA (3) ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA ATGTTTGTGA ATTCAACACA (2) CAAAAACTAA CCCTCCCCCC CCTTCCCTTC CTTATAATAA GAAGTTTTAT GCCAAACTTA GCCCCCTTCC GGGGGAATTT TAAAGTTTGT TAAGAAGGAG TCCCTGGCAT 171.2 0.1712 3T3 fibroblasts AAGGGGAAAG (4) CCCTCCCCCC CCCTCTTCTA GAGCCCATCA GCCAAACTTA GCCCCCTTCC GGGGGAATTT TAAAGTTTGT TCCCTGGCAT TTCCTGGCAT (2) 105 0.105 E15 cortex AAGGGAAAAA AAGGGGAAAG (4) CCCTCCCCCA CCCTCCCCCC CCTTCCCTTC CTTATAATAA GAAGTTTTAT GAGCCCATCA GCCAAACTTA TAAAGTTTGT TAAGAAGGAG 68.8 0.0688 P1 cortex AAGGGGAAAG (4) ATGGACTATG ATGTTAAAAA GAATTTTTAT (3) GGGGGAATTT 31.7 0.0317 Hypothalamus AATCTGGAGC AGGGTGATGC (3) ATGTTAAAAA ATGTTAGTTA ATGTTTGTGA CAAAAACTAA CCCTCCCCCA CCTTCCCTTC CTGGAGCAGT (2) GCCAAACTTA GCCCTGGCAT (2) TAAAGTTTGT TAAGAAGGAG TAATTATTTG (5) TCCCTGGCAT TGGGGAGGAG TTAATTTATT (2) 52.2 0.0522 E12.5 retina AAGGGGAAAG (4) AATATGTGAT AATCTGGAGC AGGGGAAGAG ATGTTAAAAA ATGTTAGTTA ATTCAACACA (2) CAAAAACTAA CCCTCCCCCC CCTTCCCTTC GAATTTTTAT (3) GCCAAACTTA GCCCCCTTCC GGGGGAATTT GTGCCTACAA TAAAGTTTGT TAAGAAGGAG TAATTATTTG (5) TCCCTGGCAT TTCCTGGCAT (2) 169.4 0.1694 E14.5 retina AAGGGGAAAG (4) AGGGGAAAAA ATGTTAAAAA ATGTTAGTTA ATGTTTGTGA CCCTCCCCCC CCTTCCCTTC CTTATAATAA GAAGTTTTAT GCCAAACTTA GCCCTGGCAT (2) GGGGGAATTT TAAAGTTTGT TAAGAAGGAG TAATTATTTG (5) TCCCTGGCAT TTAATTTATT (2) 109.1 0.1091 E16.5 retina AATATGTGAT ATGTCTAAAA ATGTTAAAAA ATGTTAGTTA ATTCAACACA (2) CAAAAACTAA CCCTCCCCCC CCTTCCCTTC GAAGTTTTAT GAGCCCATCA GCCAAACTTA GCCCTGGCAT (2) GGGGGAATTT TAAAGTTTGT TAAGAAGGAG TCCCTGGCAT TTAATTTATT (2) 103.1 0.1031 E18.5 retina AAGGGGAAAG (4) AATCTGGAGC ATGTAAAAAA (3) ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC CCTTCCCTTC CTTATAATAA GAAGTTTTAT GAGGGGAAAA (2) GCCAAACTTA GCCCTGGCAT (2) GGGGGAATTT TAAAGTTTGT TAATTATTTG (5) TCCCTGGCAT TGGGGAGGAG TTAATTTATT (2) 198.1 0.1981 P0.5 retina AAGGGGAAAG (4) AATCTGGAGC AGGGAGAGGG ATGTTAAAAA ATGTTAGTTA ATGTTTGTGA ATTCAACACA (2) CCCTCCCCCA CCCTCCCCCC CCCTCTTCTA CCTTCCCTTC GCCAAACTTA GCCCTGGCAT (2) GGGGGAATTT GTGCCTACAA TAAAGTTTGT TCCCCTGGCA (2) TCCCTGGCAT TGGGGAGGAG TTCCTGGCAT (2) 157.4 0.1574 P2.5 retina AATCTGGAGC AGGGTGATGC (3) ATGGACTATG ATGTCTAAAA ATGTTAAAAA ATGTTAGTTA ATGTTTGTGA ATTCAACACA (2) CAAAAACTAA CCCTCCCCCC CCTTCCCTTC CTGGAGCAGT (2) GCCAAACTTA GCCTCCCCCC GGGGGAATTT TAAAGTTTGT TAAGAAGGAG TCCCCTGGCA (2) TCCCTGGCAT 178 0.178 P4.5 retina AAGGGGAAAG (4) AATCTGGAGC AGGGAGAGGG AGGGTGATGC (3) ATGTAAAAAA (3) ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA ATTCAACACA (2) CAAAAACTAA CCCTCCCCCC CCTTCCCTTC GAAGTTTTAT GCCAAACTTA GCCCCCTTCC GGGGGAATTT TAAAGTTTGT TAATTATTTG (5) TCCCTGGCAT TGGGGAGGAG 146.8 0.1468 P6.5 retina AAGGGGAAAG (4) ATGTTAAAAA ATGTTAGTTA ATGTTTGTGA CAAAAACTAA CCCTCCCCCC CCTTCCCTTC CTTATAATAA GAAGTTTTAT GCCAAACTTA GCCCTGGCAT (2) GCCTCCCCCC GGGGGAATTT TAAAGTTTGT TAAGAAGGAG TCCCTGGCAT TTCCTGGCAT (2) 106.7 0.1067 P10.5 crx- retina AAGGGAAAAA ATGTTAGTTA CCCTCCCCCC CCTTCCCTTC GCCAAACTTA GCCCCCTTCC GGGGGAATTT TAAGAAGGAG TAATTATTTG (5) TCCCTGGCAT TTAATTTATT (2) 61.6 0.0616 P10.5 crx+ retina AAGGGAAAAA AATATGTGAT AATCTGGAGC AGGGTGATGC (3) ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA ATGTTTGTGA ATTCAACACA (2) CAAAAACTAA CCCTCCCCCC CCCTCTTCTA CCTTCCCTTC CTGGAGCAGT (2) GAAGTTTTAT GAGGGGAAAA (2) GCCAAACTTA GCCCCCTTCC GCCCTGGCAT (2) GGGGGAATTT TAAAGTTTGT TAAGAAGGAG TAATTATTTG (5) TCCCCTGGCA (2) TCCCTGGCAT 120.7 0.1207 Adult retinal AAGGGGAAAG (4) AATATGTGAT AGGGGAAAAA ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA CCCTCCCCCC CCCTCTTCTA CCTTCCCTTC CTGGAGCAGT (2) GCCAAACTTA GCCCCCTTCC GCCCTGGCAT (2) GGGGGAATTT TCCCTGGCAT TTAATTTATT (2) 61.6 0.0616 ONL AAGGGGAAAG (4) AATATGTGAT AGGGGAAAAA ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC CCCTCTTCTA GAAGTTTTAT GCCAAACTTA GGGGGAATTT TCCCTGGCAT TGGGGAGGAG TTCCTGGCAT (2) 62.8 0.0628