Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288630	Calm3	calmodulin 3	7	7 4.0 cM	12315
Gene Ontology	calcium ion binding | cell cycle | cytoplasm | G-protein coupled receptor protein signaling pathway | plasma membrane | protein binding
Human Homolog	CALM3[calmodulin 3 (phosphorylase kinase, delta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 110 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCGTTCTCC 19.6 0.0196 P8 Cb GC ATCCGCACCC (3) 9.8 0.0098 P8 Cb GC ACTGCTCTCT (5) 3.3 0.0033 P8 Cb GC CACCCCAGCC (4) 3.3 0.0033 P8 Cb GC ACGAACCTGG (3) 1.6 0.0016 P8 Cb GC ATGGCCAGAA (3) 1.6 0.0016 P8 Cb GC CCGCTCCCCC (5) 1.6 0.0016 Cb medulloblastoma ATCCGCACCC (3) 13.9 0.0139 Cb medulloblastoma CTCACAAGAA (5) 6.9 0.0069 Cb medulloblastoma ACGAACCTGG (3) 4.6 0.0046 Cb medulloblastoma CCCGTTCTCC 4.6 0.0046 Cb medulloblastoma ACTGCTCTCT (5) 2.3 0.0023 Cb medulloblastoma CCTGCCTGGG (3) 2.3 0.0023 Cb medulloblastoma TCCTGCAGCT (2) 2.3 0.0023 Cb medulloblastoma TTTAGGACAA (2) 2.3 0.0023 P8 GC+1d culture ATCCGCACCC (3) 27.4 0.0274 P8 GC+1d culture CCCGTTCTCC 16 0.016 P8 GC+1d culture GCCAGCTGCC (6) 3.4 0.0034 P8 GC+1d culture TTTAGGACAA (2) 2.3 0.0023 P8 GC+1d culture ACTGCTCTCT (5) 1.1 0.0011 P8 GC+1d culture CTTCCAAAAA (10) 1.1 0.0011 P8 GC+1d culture TCCCGCTGCT (3) 1.1 0.0011 P8 GC+SHH+1d culture CCCGTTCTCC 18.7 0.0187 P8 GC+SHH+1d culture ATCCGCACCC (3) 17.6 0.0176 P8 GC+SHH+1d culture TCCCGCTGCT (3) 3.5 0.0035 P8 GC+SHH+1d culture CAGCCTGGGA (2) 2.3 0.0023 P8 GC+SHH+1d culture CTCACAAGAA (5) 2.3 0.0023 P8 GC+SHH+1d culture TCCTGCAGCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTAGGACAA (2) 1.2 0.0012 3T3 fibroblasts ATCCGCACCC (3) 31.5 0.0315 3T3 fibroblasts CACCCCAGCC (4) 7 0.007 3T3 fibroblasts CCCGTTCTCC 3.5 0.0035 3T3 fibroblasts CCTGCCTGGG (3) 3.5 0.0035 E15 cortex ATCCGCACCC (3) 34.6 0.0346 E15 cortex CCCGTTCTCC 34.6 0.0346 E15 cortex TCCAGACCTG (5) 19.8 0.0198 E15 cortex ACGAACCTGG (3) 4.9 0.0049 E15 cortex CACCCCAGCC (4) 4.9 0.0049 P1 cortex ATCCGCACCC (3) 40.9 0.0409 P1 cortex CCCGTTCTCC 9.1 0.0091 P1 cortex TCCAGACCTG (5) 9.1 0.0091 Hypothalamus CCCGTTCTCC 9.1 0.0091 Hypothalamus CTCACAAGAA (5) 9.1 0.0091 Hypothalamus ATCCGCACCC (3) 7.2 0.0072 Hypothalamus ACTGCTCTCT (5) 5.4 0.0054 Hypothalamus GCCAGCTGCC (6) 5.4 0.0054 Hypothalamus CCGCTCCCCC (5) 3.6 0.0036 Hypothalamus CTTCCAAAAA (10) 1.8 0.0018 E12.5 retina CCCGTTCTCC 7.5 0.0075 E12.5 retina CACCCCAGCC (4) 1.9 0.0019 E12.5 retina CAGCCTGGGA (2) 1.9 0.0019 E12.5 retina CCTGCCTGGG (3) 1.9 0.0019 E12.5 retina TGAGACATTC (2) 1.9 0.0019 E14.5 retina CCCGTTCTCC 9.1 0.0091 E14.5 retina TGAGACATTC (2) 3.6 0.0036 E14.5 retina ATCCGCACCC (3) 1.8 0.0018 E14.5 retina CCTGCCTGGG (3) 1.8 0.0018 E16.5 retina CCCGTTCTCC 10.9 0.0109 E16.5 retina ACGAACCTGG (3) 1.8 0.0018 E16.5 retina ACTGCTCTCT (5) 1.8 0.0018 E16.5 retina ATCCGCACCC (3) 1.8 0.0018 E16.5 retina CCTGCCTGGG (3) 1.8 0.0018 E16.5 retina GCCAGCTGCC (6) 1.8 0.0018 E18.5 retina CCCGTTCTCC 10.9 0.0109 E18.5 retina ATCCGCACCC (3) 1.8 0.0018 E18.5 retina CACCCCAGCC (4) 1.8 0.0018 E18.5 retina CTTCCAAAAA (10) 1.8 0.0018 E18.5 retina TCCCGCTGCT (3) 1.8 0.0018 E18.5 retina TGAGACATTC (2) 1.8 0.0018 P0.5 retina CCCGTTCTCC 17.7 0.0177 P0.5 retina ATCCGCACCC (3) 3.9 0.0039 P0.5 retina CCTGCCTGGG (3) 2 0.002 P0.5 retina TCCTGCAGCT (2) 2 0.002 P0.5 retina TGAGACATTC (2) 2 0.002 P2.5 retina CCCGTTCTCC 5.3 0.0053 P2.5 retina ATCCGCACCC (3) 3.5 0.0035 P2.5 retina ACGAACCTGG (3) 1.8 0.0018 P2.5 retina TGAGACATTC (2) 1.8 0.0018 P4.5 retina ATCCGCACCC (3) 9.9 0.0099 P4.5 retina CCCGTTCTCC 5.9 0.0059 P4.5 retina CACCCCAGCC (4) 2 0.002 P4.5 retina CTTCCAAAAA (10) 2 0.002 P6.5 retina ATCCGCACCC (3) 8.3 0.0083 P6.5 retina CCCGTTCTCC 3.3 0.0033 P6.5 retina TGAGACATTC (2) 1.7 0.0017 P10.5 crx- retina CCCGTTCTCC 27.9 0.0279 P10.5 crx- retina ATCCGCACCC (3) 20.4 0.0204 P10.5 crx- retina TCCCGCTGCT (3) 5.6 0.0056 P10.5 crx- retina ACGAACCTGG (3) 1.9 0.0019 P10.5 crx- retina ACTGCTCTCT (5) 1.9 0.0019 P10.5 crx- retina CACCCCAGCC (4) 1.9 0.0019 P10.5 crx- retina CTCACAAGAA (5) 1.9 0.0019 P10.5 crx- retina TCCAGACCTG (5) 1.9 0.0019 P10.5 crx+ retina ATCCGCACCC (3) 19.2 0.0192 P10.5 crx+ retina CCCGTTCTCC 7.7 0.0077 P10.5 crx+ retina ACGAACCTGG (3) 1.9 0.0019 P10.5 crx+ retina ACTGCTCTCT (5) 1.9 0.0019 P10.5 crx+ retina CACCCCAGCC (4) 1.9 0.0019 P10.5 crx+ retina TCCCGCTGCT (3) 1.9 0.0019 P10.5 crx+ retina TTTAGGACAA (2) 1.9 0.0019 Adult retinal CCTGCCTGGG (3) 7.4 0.0074 Adult retinal CCCGTTCTCC 5.6 0.0056 Adult retinal ATCCGCACCC (3) 3.7 0.0037 Adult retinal ATGGCCAGAA (3) 3.7 0.0037 Adult retinal CACCCCAGCC (4) 1.9 0.0019 Adult retinal TCCTGCAGCT (2) 1.9 0.0019 ONL ATCCGCACCC (3) 5.7 0.0057 ONL CCCGTTCTCC 3.8 0.0038 ONL CCTGCCTGGG (3) 3.8 0.0038 ONL TTTAGGACAA (2) 1.9 0.0019