Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288693	Erdr1	erythroid differentiation regulator 1		ND	170942
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 12 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTAACA (10) 6.5 0.0065 P8 Cb GC ACCAATGAAC (5) 4.9 0.0049 P8 Cb GC TCCCCCTCAA (4) 3.3 0.0033 P8 Cb GC AGAGGCACCA (3) 1.6 0.0016 Cb medulloblastoma ACCAATGAAC (5) 434.7 0.4347 Cb medulloblastoma GTGGCTAACA (10) 13.9 0.0139 Cb medulloblastoma TTATATTTTT (6) 6.9 0.0069 Cb medulloblastoma TACAAGTACC (4) 2.3 0.0023 P8 GC+1d culture ACCAATGAAC (5) 16 0.016 P8 GC+1d culture GTGGCTAACA (10) 8 0.008 P8 GC+1d culture TACAAGTACC (4) 6.8 0.0068 P8 GC+1d culture GCAGAGACAT (5) 3.4 0.0034 P8 GC+1d culture CAACTCTGAG (2) 1.1 0.0011 P8 GC+1d culture TTATATTTTC 1.1 0.0011 P8 GC+1d culture TTTTAAAGCA (3) 1.1 0.0011 P8 GC+SHH+1d culture TTAAATGGAA (2) 34 0.034 P8 GC+SHH+1d culture GTGGCTAACA (10) 11.7 0.0117 P8 GC+SHH+1d culture ACCAATGAAC (5) 3.5 0.0035 P8 GC+SHH+1d culture GCAGAGACAT (5) 2.3 0.0023 P8 GC+SHH+1d culture AGACTATGCG 1.2 0.0012 P8 GC+SHH+1d culture CCCACGGGAC (5) 1.2 0.0012 P8 GC+SHH+1d culture TCCCCCTCAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTATATTTTC 1.2 0.0012 3T3 fibroblasts CCCACGGGAC (5) 14 0.014 3T3 fibroblasts GCAGAGACAT (5) 10.5 0.0105 3T3 fibroblasts GTGGCTAACA (10) 10.5 0.0105 3T3 fibroblasts GTGGGCGTGA (2) 7 0.007 E15 cortex GTGGCTAACA (10) 9.9 0.0099 E15 cortex CCCACGGGAC (5) 4.9 0.0049 P1 cortex TACAAGTACC (4) 13.6 0.0136 P1 cortex AGACTATGCG 9.1 0.0091 P1 cortex GCAGAGACAT (5) 9.1 0.0091 P1 cortex GTGGCTAACA (10) 9.1 0.0091 P1 cortex ACCAATGAAC (5) 4.5 0.0045 P1 cortex AGAGGCACCA (3) 4.5 0.0045 P1 cortex TTATATTTTT (6) 4.5 0.0045 Hypothalamus ACCAATGAAC (5) 831.3 0.8313 Hypothalamus GTGGCTAACA (10) 25.4 0.0254 Hypothalamus TCCCCCTCAA (4) 7.2 0.0072 Hypothalamus TTTTAAAGCA (3) 3.6 0.0036 Hypothalamus AGAGGCACCA (3) 1.8 0.0018 Hypothalamus GCAGAGACAT (5) 1.8 0.0018 Hypothalamus TACAAGTACC (4) 1.8 0.0018 E12.5 retina TCCCCCTCAA (4) 62 0.062 E12.5 retina GTGGCTAACA (10) 15 0.015 E12.5 retina GCAGAGACAT (5) 13.1 0.0131 E12.5 retina ACCAATGAAC (5) 5.6 0.0056 E12.5 retina TTTTAAAGCA (3) 5.6 0.0056 E12.5 retina TCCCCCCTCA (3) 3.8 0.0038 E12.5 retina AAAGCACACA 1.9 0.0019 E12.5 retina ATGATGATAG (4) 1.9 0.0019 E14.5 retina TCCCCCTCAA (4) 82 0.082 E14.5 retina GCAGAGACAT (5) 14.6 0.0146 E14.5 retina GTGGCTAACA (10) 14.6 0.0146 E14.5 retina ACCAATGAAC (5) 3.6 0.0036 E14.5 retina AGAGGCACCA (3) 3.6 0.0036 E14.5 retina ATGATGATAG (4) 3.6 0.0036 E14.5 retina AAAGCACACA 1.8 0.0018 E14.5 retina GGTGTGATCC 1.8 0.0018 E14.5 retina TTTTAAAGCA (3) 1.8 0.0018 E16.5 retina TCCCCCTCAA (4) 47.1 0.0471 E16.5 retina GTGGCTAACA (10) 30.8 0.0308 E16.5 retina GCAGAGACAT (5) 29 0.029 E16.5 retina AAAGCACACA 3.6 0.0036 E16.5 retina ACCAATGAAC (5) 1.8 0.0018 E16.5 retina AGAGGCACCA (3) 1.8 0.0018 E16.5 retina ATGATGATAG (4) 1.8 0.0018 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GGTGTGATCC 1.8 0.0018 E16.5 retina GTGGGCGTGA (2) 1.8 0.0018 E16.5 retina TACAAGTACC (4) 1.8 0.0018 E16.5 retina TCCCCCCTCA (3) 1.8 0.0018 E16.5 retina TTATATTTTT (6) 1.8 0.0018 E16.5 retina TTCCTTCCCA (3) 1.8 0.0018 E16.5 retina TTTTAAAGCA (3) 1.8 0.0018 E18.5 retina TCCCCCTCAA (4) 60 0.06 E18.5 retina GTGGCTAACA (10) 12.7 0.0127 E18.5 retina ACCAATGAAC (5) 3.6 0.0036 E18.5 retina GGTGTGATCC 3.6 0.0036 E18.5 retina TTATATTTTT (6) 3.6 0.0036 E18.5 retina AAAGCACACA 1.8 0.0018 E18.5 retina GCAGAGACAT (5) 1.8 0.0018 E18.5 retina TTCCTTCCCA (3) 1.8 0.0018 P0.5 retina GTGGCTAACA (10) 13.7 0.0137 P0.5 retina AGAGGCACCA (3) 5.9 0.0059 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina TTATATTTTT (6) 2 0.002 P2.5 retina GTGGCTAACA (10) 10.6 0.0106 P2.5 retina ACCAATGAAC (5) 5.3 0.0053 P2.5 retina GGTGTGATCC 3.5 0.0035 P2.5 retina CAACTCTGAG (2) 1.8 0.0018 P2.5 retina GGACCACACC (5) 1.8 0.0018 P2.5 retina TTATATTTTT (6) 1.8 0.0018 P4.5 retina GTGGCTAACA (10) 17.8 0.0178 P4.5 retina ACCAATGAAC (5) 4 0.004 P4.5 retina TTATATTTTT (6) 4 0.004 P6.5 retina GTGGCTAACA (10) 15 0.015 P6.5 retina ACCAATGAAC (5) 13.3 0.0133 P6.5 retina ATGATGATAG (4) 1.7 0.0017 P6.5 retina GGTGTGATCC 1.7 0.0017 P6.5 retina TTATATTTTT (6) 1.7 0.0017 P6.5 retina TTTTAAAGCA (3) 1.7 0.0017 P10.5 crx- retina TCCCCCTCAA (4) 11.1 0.0111 P10.5 crx- retina GTGGCTAACA (10) 3.7 0.0037 P10.5 crx- retina CAACTCTGAG (2) 1.9 0.0019 P10.5 crx- retina CCCACGGGAC (5) 1.9 0.0019 P10.5 crx- retina GCAGAGACAT (5) 1.9 0.0019 P10.5 crx- retina GGTGTGATCC 1.9 0.0019 P10.5 crx- retina TACAAGTACC (4) 1.9 0.0019 P10.5 crx- retina TCCCCCCTCA (3) 1.9 0.0019 P10.5 crx+ retina GTGGCTAACA (10) 11.5 0.0115 P10.5 crx+ retina ACCAATGAAC (5) 9.6 0.0096 P10.5 crx+ retina GCAGAGACAT (5) 3.8 0.0038 P10.5 crx+ retina TACAAGTACC (4) 3.8 0.0038 P10.5 crx+ retina TCCCCCCTCA (3) 1.9 0.0019 P10.5 crx+ retina TCCCCCTCAA (4) 1.9 0.0019 P10.5 crx+ retina TTAAATGGAA (2) 1.9 0.0019 P10.5 crx+ retina TTTTAAAGCA (3) 1.9 0.0019 Adult retinal ACCAATGAAC (5) 46.3 0.0463 Adult retinal GTGGCTAACA (10) 11.1 0.0111 Adult retinal TCCCCCTCAA (4) 7.4 0.0074 Adult retinal ATGATGATAG (4) 3.7 0.0037 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GCAGAGACAT (5) 3.7 0.0037 Adult retinal TACAAGTACC (4) 3.7 0.0037 Adult retinal CCCACGGGAC (5) 1.9 0.0019 Adult retinal GGTGTGATCC 1.9 0.0019 Adult retinal GTGGGCGTGA (2) 1.9 0.0019 Adult retinal TTATATTTTC 1.9 0.0019 ONL ATGATGATAG (4) 21.1 0.0211 ONL ACCAATGAAC (5) 9.6 0.0096 ONL GTGGCTAACA (10) 7.7 0.0077 ONL TCCCCCCTCA (3) 1.9 0.0019 ONL TTATATTTTC 1.9 0.0019 ONL TTATATTTTT (6) 1.9 0.0019 ONL TTCCTTCCCA (3) 1.9 0.0019