Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.288698
2610011I18Rik
RIKEN cDNA 2610011I18 gene
10
70295
Mm.288698
Srgap1
SLIT-ROBO Rho GTPase activating protein 1
10
117600
Mm.288698
C030027H14Rik
RIKEN cDNA C030027H14 gene
10
77465
Mm.288698
4930402N20Rik
RIKEN cDNA 4930402N20 gene
10
73819
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 18 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTTCTGTTC
(
5
)
TGGGACGCCA
(
4
)
4.9
0.0049
Cb medulloblastoma
TACCATTACA
(
4
)
2.3
0.0023
P8 GC+1d culture
TACCATTACA
(
4
)
TGGGACGCCA
(
4
)
2.2
0.0022
P8 GC+SHH+1d culture
TACCATTACA
(
4
)
1.2
0.0012
E15 cortex
TGGGACGCCA
(
4
)
9.9
0.0099
P1 cortex
TACCATTACA
(
4
)
TGGGACGCCA
(
4
)
22.7
0.0227
Hypothalamus
TACCATTACA
(
4
)
1.8
0.0018
E12.5 retina
TACCATTACA
(
4
)
1.9
0.0019
E16.5 retina
ACTTCTGTTC
(
5
)
TACCATTACA
(
4
)
3.6
0.0036
P4.5 retina
TACCATTACA
(
4
)
TGGGACGCCA
(
4
)
6
0.006
P6.5 retina
TACCATTACA
(
4
)
1.7
0.0017
P10.5 crx- retina
TACCATTACA
(
4
)
3.7
0.0037
Adult retinal
TGGGACGCCA
(
4
)
1.9
0.0019
