| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTTCTGTGAA (4)
| 9.8 | 0.0098 |
| P8 GC+1d culture | TATATGTGTA (5) TTGCCAGATG (4) TTTCTGTGAA (4)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | CCCTGTCCTC (4) TATATGTGTA (5) TTTCTGTGAA (4)
| 11.8 | 0.0118 |
| E15 cortex | CCCTGTCCTC (4) TTTCTGTGAA (4)
| 9.8 | 0.0098 |
| Hypothalamus | GCAAGGAACA (4) TATATGTGTA (5)
| 3.6 | 0.0036 |
| E12.5 retina | TTTCTGTGAA (4)
| 9.4 | 0.0094 |
| E14.5 retina | TAGGTCGGCA (4) TTTCTGTGAA (4)
| 10.9 | 0.0109 |
| E16.5 retina | CCCTGTCCTC (4) TAGGTCGGCA (4) TATATGTGTA (5) TTTCTGTGAA (4)
| 23.5 | 0.0235 |
| E18.5 retina | TTTCTGTGAA (4)
| 5.5 | 0.0055 |
| P0.5 retina | GCAAGGAACA (4) TATATGTGTA (5) TTGCCAGATG (4) TTTCTGTGAA (4)
| 9.9 | 0.0099 |
| P2.5 retina | CCCTGTCCTC (4) TATATGTGTA (5) TTTCTGTGAA (4)
| 12.4 | 0.0124 |
| P4.5 retina | TTTCTGTGAA (4)
| 9.9 | 0.0099 |
| P6.5 retina | TTTCTGTGAA (4)
| 6.7 | 0.0067 |
| P10.5 crx- retina | GCAAGGAACA (4) TAGGTCGGCA (4) TATATGTGTA (5) TTTCTGTGAA (4)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | TTTCTGTGAA (4)
| 7.7 | 0.0077 |
| Adult retinal | GCAAGGAACA (4) TTTCTGTGAA (4)
| 9.3 | 0.0093 |
| ONL | GCAAGGAACA (4) TTTCTGTGAA (4)
| 3.8 | 0.0038 |