Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288741	Scap	SREBP cleavage activating protein	9	9 58.0 cM	235623
Gene Ontology	cholesterol binding | cholesterol metabolism | endoplasmic reticulum membrane | endoplasmic reticulum membrane | protein binding | protein binding | regulation of fatty acid metabolism
Human Homolog	SCAP[SREBP CLEAVAGE-ACTIVATING PROTEIN]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 18 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTACTGGCCA (2) 3.3 0.0033 Cb medulloblastoma GTACTGGCCA (2) 4.6 0.0046 Cb medulloblastoma TGCTGAGAGA (2) 2.3 0.0023 P8 GC+1d culture CCTCTTGTGT 2.3 0.0023 P8 GC+SHH+1d culture GTACTGGCCA (2) 1.2 0.0012 3T3 fibroblasts GTACTGGCCA (2) 21 0.021 E15 cortex GTACTGGCCA (2) 4.9 0.0049 Hypothalamus GTACTGGCCA (2) 3.6 0.0036 E16.5 retina CCTCTTGTGT 1.8 0.0018 P0.5 retina GTACTGGCCA (2) 7.9 0.0079 P0.5 retina TGCTGAGAGA (2) 2 0.002 P4.5 retina GTACTGGCCA (2) 4 0.004 P6.5 retina GTACTGGCCA (2) 8.3 0.0083 P6.5 retina TGCTGAGAGA (2) 1.7 0.0017 P10.5 crx- retina GTACTGGCCA (2) 3.7 0.0037 P10.5 crx+ retina GTACTGGCCA (2) 1.9 0.0019 Adult retinal GTACTGGCCA (2) 9.3 0.0093 ONL GTACTGGCCA (2) 3.8 0.0038