Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288765	Ppp2cb	protein phosphatase 2a, catalytic subunit, beta isoform	8	8 20.0 cM	19053
Gene Ontology	CTD phosphatase activity | cytoplasm | hydrolase activity | manganese ion binding | myosin phosphatase activity | nucleus | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein binding | protein phosphatase type 1 activity | protein phosphatase type 2A activity | protein phosphatase type 2A activity | protein phosphatase type 2C activity | protein serine/threonine phosphatase activity
Human Homolog	PPP2CB[protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAATAAAC (5) 24.5 0.0245 P8 Cb GC ACAGTGCTTG 21.2 0.0212 P8 Cb GC AGGCTCTCCA (4) 1.6 0.0016 P8 Cb GC GATTATAGAG 1.6 0.0016 P8 Cb GC TGACCCGGCG 1.6 0.0016 Cb medulloblastoma ACAGTGCTTG 39.3 0.0393 Cb medulloblastoma ACAAATAAAC (5) 18.5 0.0185 Cb medulloblastoma AGGCTCTCCA (4) 9.2 0.0092 Cb medulloblastoma ACAAATATAC 2.3 0.0023 Cb medulloblastoma TGACCCGGCG 2.3 0.0023 P8 GC+1d culture ACAGTGCTTG 25.1 0.0251 P8 GC+1d culture ACAAATAAAC (5) 19.4 0.0194 P8 GC+1d culture TGACCCGGCG 5.7 0.0057 P8 GC+1d culture AGGCTCTCCA (4) 2.3 0.0023 P8 GC+1d culture ACAAATATAC 1.1 0.0011 P8 GC+SHH+1d culture ACAAATAAAC (5) 38.6 0.0386 P8 GC+SHH+1d culture ACAGTGCTTG 17.6 0.0176 P8 GC+SHH+1d culture AGGCTCTCCA (4) 3.5 0.0035 P8 GC+SHH+1d culture TGACCCGGCG 2.3 0.0023 P8 GC+SHH+1d culture GATTATAGAG 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts ACAGTGCTTG 3.5 0.0035 E15 cortex TGACCCGGCG 9.9 0.0099 E15 cortex ACAAATAAAC (5) 4.9 0.0049 E15 cortex ACAGTGCTTG 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex ACAAATAAAC (5) 9.1 0.0091 P1 cortex ACAGTGCTTG 9.1 0.0091 Hypothalamus ACAGTGCTTG 19.9 0.0199 Hypothalamus AGGCTCTCCA (4) 10.9 0.0109 Hypothalamus ACAAATAAAC (5) 7.2 0.0072 Hypothalamus ACAAATATAC 1.8 0.0018 Hypothalamus TAGCCCAGGT (7) 1.8 0.0018 E12.5 retina ACAAATAAAC (5) 31.9 0.0319 E12.5 retina ACAGTGCTTG 16.9 0.0169 E12.5 retina AGGCTCTCCA (4) 5.6 0.0056 E12.5 retina ACAAATATAC 1.9 0.0019 E14.5 retina ACAAATAAAC (5) 29.2 0.0292 E14.5 retina ACAGTGCTTG 14.6 0.0146 E14.5 retina AGGCTCTCCA (4) 5.5 0.0055 E14.5 retina TAGCCCAGGT (7) 3.6 0.0036 E16.5 retina ACAAATAAAC (5) 30.8 0.0308 E16.5 retina ACAGTGCTTG 25.4 0.0254 E16.5 retina AGGCTCTCCA (4) 12.7 0.0127 E16.5 retina TGACCCGGCG 3.6 0.0036 E18.5 retina ACAAATAAAC (5) 50.9 0.0509 E18.5 retina ACAGTGCTTG 23.6 0.0236 E18.5 retina AGGCTCTCCA (4) 20 0.02 E18.5 retina GATTATAGAG 1.8 0.0018 E18.5 retina TGACCCGGCG 1.8 0.0018 P0.5 retina ACAAATAAAC (5) 13.7 0.0137 P0.5 retina ACAGTGCTTG 11.8 0.0118 P0.5 retina AGGCTCTCCA (4) 11.8 0.0118 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina AGGCTCTCCA (4) 24.6 0.0246 P2.5 retina ACAAATAAAC (5) 21.1 0.0211 P2.5 retina ACAGTGCTTG 14.1 0.0141 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina ACAAATAAAC (5) 31.7 0.0317 P4.5 retina AGGCTCTCCA (4) 25.8 0.0258 P4.5 retina ACAGTGCTTG 17.8 0.0178 P4.5 retina GATTATAGAG 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina ACAAATAAAC (5) 30 0.03 P6.5 retina AGGCTCTCCA (4) 28.3 0.0283 P6.5 retina ACAGTGCTTG 16.7 0.0167 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TAGCCCAGGT (7) 1.7 0.0017 P6.5 retina TGACCCGGCG 1.7 0.0017 P10.5 crx- retina ACAAATAAAC (5) 9.3 0.0093 P10.5 crx- retina ACAGTGCTTG 7.4 0.0074 P10.5 crx- retina AGGCTCTCCA (4) 3.7 0.0037 P10.5 crx+ retina ACAGTGCTTG 25 0.025 P10.5 crx+ retina ACAAATAAAC (5) 21.1 0.0211 P10.5 crx+ retina AGGCTCTCCA (4) 9.6 0.0096 Adult retinal ACAGTGCTTG 5.6 0.0056 Adult retinal AGGCTCTCCA (4) 5.6 0.0056 Adult retinal ACAAATAAAC (5) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAGCCCAGGT (7) 1.9 0.0019 ONL GATTATAGAG 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL ACAGTGCTTG 3.8 0.0038 ONL ACAAATAAAC (5) 1.9 0.0019 ONL ACAAATATAC 1.9 0.0019 ONL TAGCCCAGGT (7) 1.9 0.0019