Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288860	3110021A11Rik	RIKEN cDNA 3110021A11 gene	6		67289
Mm.288860	Rab6ip2	Rab6 interacting protein 2	6		111173
Gene Ontology	cytoplasm | protein binding | protein transport | Rab interactor activity | retrograde transport, endosome to Golgi
Human Homolog	ELKS[Rab6-interacting protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGCAGCTC (4) 1.6 0.0016 Cb medulloblastoma TGTGCAGCTC (4) 2.3 0.0023 Cb medulloblastoma TTCATTGCAG (3) 2.3 0.0023 P8 GC+1d culture TGTGCAGCTC (4) 5.7 0.0057 P8 GC+1d culture TTCATTGCAG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGTGCAGCTC (4) 4.7 0.0047 P8 GC+SHH+1d culture TTCATTGCAG (3) 2.3 0.0023 3T3 fibroblasts TTCATTGCAG (3) 3.5 0.0035 E15 cortex CTGAGCACGA (3) 9.9 0.0099 E15 cortex TGTGCAGCTC (4) 9.9 0.0099 Hypothalamus CTGAGCACGA (3) 1.8 0.0018 E14.5 retina TTCATTGCAG (3) 3.6 0.0036 E14.5 retina GAGGTGCTTT (5) 1.8 0.0018 E14.5 retina TGTGCAGCTC (4) 1.8 0.0018 E16.5 retina TTCATTGCAG (3) 1.8 0.0018 P0.5 retina TTCATTGCAG (3) 3.9 0.0039 P0.5 retina CTGAGCACGA (3) 2 0.002 P0.5 retina TGTGCAGCTC (4) 2 0.002 P2.5 retina TTCATTGCAG (3) 3.5 0.0035 P4.5 retina TGTGCAGCTC (4) 4 0.004 P4.5 retina CTGAGCACGA (3) 2 0.002 P4.5 retina TTCATTGCAG (3) 2 0.002 P6.5 retina TTCATTGCAG (3) 3.3 0.0033 P6.5 retina CCTTTCTGGT (7) 1.7 0.0017 P10.5 crx- retina TGTGCAGCTC (4) 5.6 0.0056 P10.5 crx- retina TTCATTGCAG (3) 3.7 0.0037 P10.5 crx- retina GAGGTGCTTT (5) 1.9 0.0019 P10.5 crx+ retina TGTGCAGCTC (4) 1.9 0.0019 Adult retinal TTCATTGCAG (3) 7.4 0.0074 Adult retinal TGTGCAGCTC (4) 3.7 0.0037 Adult retinal GAGGTGCTTT (5) 1.9 0.0019 ONL CCTTTCTGGT (7) 3.8 0.0038 ONL TTCATTGCAG (3) 1.9 0.0019