Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28888	Irx2	Iroquois related homeobox 2 (Drosophila)	13	13 43.0 cM	16372
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GAAGAAAACA (9) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GAAGAAAACA (9) 1.2 0.0012 3T3 fibroblasts CCCAAGGCGG (2) 10.5 0.0105 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GAAGAAAACA (9) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GAAGAAAACA (9) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GAAGAAAACA (9) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GAAGAAAACA (9) 5.6 0.0056 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GAAGAAAACA (9) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GAAGAAAACA (9) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GAAGAAAACA (9) 3.6 0.0036 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina ATTACGCCAA (233) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GAAGAAAACA (9) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GAAGAAAACA (9) 3.3 0.0033 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina CCCAAGGCGG (2) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal ATTACGCCAA (233) 3.7 0.0037 ONL GAAAAAAAAA (204) 24.9 0.0249