Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288897	Chpt1	choline phosphotransferase 1	10		212862
Gene Ontology	biological_process unknown | cellular_component unknown | transferase activity
Human Homolog	CHPT1[choline phosphotransferase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGAAATA (4) 13.1 0.0131 P8 Cb GC GGGAAAAAAA (36) 1.6 0.0016 P8 Cb GC TGTCATTTAA (3) 1.6 0.0016 P8 Cb GC TTTAATTTTT (7) 1.6 0.0016 Cb medulloblastoma GGGAAAAAAA (36) 92.5 0.0925 Cb medulloblastoma AAAAGAAATA (4) 41.6 0.0416 Cb medulloblastoma TGTCATTTAA (3) 4.6 0.0046 Cb medulloblastoma GTGGATCACA (7) 2.3 0.0023 P8 GC+1d culture AAAAGAAATA (4) 11.4 0.0114 P8 GC+1d culture GTGGATCACA (7) 2.3 0.0023 P8 GC+1d culture AAGTCTTGAA 1.1 0.0011 P8 GC+1d culture GGGAAAAAAA (36) 1.1 0.0011 P8 GC+1d culture TTTAATTTTT (7) 1.1 0.0011 P8 GC+SHH+1d culture AAAAGAAATA (4) 10.5 0.0105 P8 GC+SHH+1d culture GTGGATCACA (7) 3.5 0.0035 P8 GC+SHH+1d culture GCGGCGGGCG (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAAAAAA (36) 1.2 0.0012 E15 cortex GTGGATCACA (7) 4.9 0.0049 P1 cortex AAAAGAAATA (4) 4.5 0.0045 P1 cortex GGGAAAAAAA (36) 4.5 0.0045 Hypothalamus GGGAAAAAAA (36) 41.7 0.0417 Hypothalamus AAAAGAAATA (4) 25.4 0.0254 Hypothalamus AAGTCTTGAA 1.8 0.0018 Hypothalamus GTGGATCACA (7) 1.8 0.0018 Hypothalamus TGTCATTTAA (3) 1.8 0.0018 E12.5 retina AAAAGAAATA (4) 5.6 0.0056 E12.5 retina GCGGCGGGCG (4) 5.6 0.0056 E12.5 retina GTGGATCACA (7) 3.8 0.0038 E12.5 retina TGTCATTTAA (3) 1.9 0.0019 E14.5 retina AAAAGAAATA (4) 25.5 0.0255 E14.5 retina GTGGATCACA (7) 3.6 0.0036 E14.5 retina GGGAAAAAAA (36) 1.8 0.0018 E14.5 retina TCAACAAGCA (2) 1.8 0.0018 E16.5 retina AAAAGAAATA (4) 23.5 0.0235 E16.5 retina GTGGATCACA (7) 5.4 0.0054 E16.5 retina GGGAAAAAAA (36) 3.6 0.0036 E16.5 retina GCGGCGGGCG (4) 1.8 0.0018 E18.5 retina AAAAGAAATA (4) 27.3 0.0273 E18.5 retina GGAAAAAAAT (11) 1.8 0.0018 E18.5 retina GGGAAAAAAA (36) 1.8 0.0018 P0.5 retina GGGAAAAAAA (36) 3.9 0.0039 P0.5 retina AAAAGAAATA (4) 2 0.002 P0.5 retina GTGGATCACA (7) 2 0.002 P2.5 retina AAAAGAAATA (4) 14.1 0.0141 P2.5 retina GGGAAAAAAA (36) 7 0.007 P2.5 retina GGAAAAAAAT (11) 1.8 0.0018 P2.5 retina TTTAATTTTT (7) 1.8 0.0018 P4.5 retina AAAAGAAATA (4) 13.9 0.0139 P4.5 retina GGGAAAAAAA (36) 9.9 0.0099 P4.5 retina GTGGATCACA (7) 5.9 0.0059 P4.5 retina TGTCATTTAA (3) 2 0.002 P6.5 retina AAAAGAAATA (4) 30 0.03 P6.5 retina GGGAAAAAAA (36) 20 0.02 P6.5 retina GTGGATCACA (7) 3.3 0.0033 P6.5 retina AAGTCTTGAA 1.7 0.0017 P6.5 retina GGAAAAAAAT (11) 1.7 0.0017 P6.5 retina TTTAATTTTT (7) 1.7 0.0017 P10.5 crx- retina GGGAAAAAAA (36) 11.1 0.0111 P10.5 crx- retina AAAAGAAATA (4) 3.7 0.0037 P10.5 crx+ retina GGGAAAAAAA (36) 23.1 0.0231 P10.5 crx+ retina AAAAGAAATA (4) 5.8 0.0058 P10.5 crx+ retina GTGGATCACA (7) 1.9 0.0019 Adult retinal GGGAAAAAAA (36) 35.2 0.0352 Adult retinal GTGGATCACA (7) 3.7 0.0037 Adult retinal GCGGCGGGCG (4) 1.9 0.0019 ONL GGGAAAAAAA (36) 30.6 0.0306 ONL AAAAGAAATA (4) 11.5 0.0115 ONL GTGGATCACA (7) 3.8 0.0038 ONL GGAAAAAAAT (11) 1.9 0.0019