Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28922
Farslb
phenylalanine-tRNA synthetase-like, beta subunit
1
23874
Mm.28922
4833412K13Rik
RIKEN cDNA 4833412K13 gene
1
74607
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
GGAAAGGCAA (
7
)
6.9
0.0069
Cb medulloblastoma
GAAAAGAAAA
(
12
)
2.3
0.0023
Cb medulloblastoma
TGACATTGTC (
4
)
2.3
0.0023
P8 GC+1d culture
GGAAAGGCAA (
7
)
10.3
0.0103
P8 GC+1d culture
TGACATTGTC (
4
)
3.4
0.0034
P8 GC+1d culture
CCCTGTTCCT
(
3
)
2.3
0.0023
P8 GC+1d culture
CTTTGATGAT (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAAAGGCAA (
7
)
7
0.007
P8 GC+SHH+1d culture
GAAAAGAAAA
(
12
)
4.7
0.0047
P8 GC+SHH+1d culture
CCCTGTTCCT
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
CCTTCCATTA (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GCTGCGGCTG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CCCTCTTCCT
(
9
)
1.2
0.0012
P8 GC+SHH+1d culture
CTTTGATGAT (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TGACATTGTC (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTCCAGTGA (
5
)
1.2
0.0012
3T3 fibroblasts
CCCTGTTCCT
(
3
)
7
0.007
3T3 fibroblasts
GCTGCGGCTG
(
2
)
3.5
0.0035
E15 cortex
CCCTGTTCCT
(
3
)
4.9
0.0049
E15 cortex
TTTCCAGTGA (
5
)
4.9
0.0049
P1 cortex
CCCTGTTCCT
(
3
)
9.1
0.0091
P1 cortex
TGACATTGTC (
4
)
4.5
0.0045
P1 cortex
TGACCCCTGT (
5
)
4.5
0.0045
Hypothalamus
TGACATTGTC (
4
)
14.5
0.0145
Hypothalamus
CCCTCTTCCT
(
9
)
1.8
0.0018
Hypothalamus
CCCTGTTCCT
(
3
)
1.8
0.0018
Hypothalamus
GGAAAGGCAA (
7
)
1.8
0.0018
Hypothalamus
TTGTACAGCC
(
4
)
1.8
0.0018
E12.5 retina
GCTGCGGCTG
(
2
)
5.6
0.0056
E12.5 retina
CCCTGTTCCT
(
3
)
3.8
0.0038
E12.5 retina
CTTTGATGAT (
7
)
1.9
0.0019
E12.5 retina
GGAAAGGCAA (
7
)
1.9
0.0019
E12.5 retina
GTGTGGTCCT
(
5
)
1.9
0.0019
E12.5 retina
TGACCCCTGT (
5
)
1.9
0.0019
E14.5 retina
TGACCCCTGT (
5
)
5.5
0.0055
E14.5 retina
CCCTCTTCCT
(
9
)
1.8
0.0018
E14.5 retina
CCCTGTTCCT
(
3
)
1.8
0.0018
E14.5 retina
TTTCCAGTGA (
5
)
1.8
0.0018
E16.5 retina
TGACATTGTC (
4
)
7.2
0.0072
E16.5 retina
TTTCCAGTGA (
5
)
5.4
0.0054
E16.5 retina
CCCTGTTCCT
(
3
)
1.8
0.0018
E16.5 retina
TTGTACAGCC
(
4
)
1.8
0.0018
E18.5 retina
CTTTGATGAT (
7
)
3.6
0.0036
P0.5 retina
CCCTGTTCCT
(
3
)
5.9
0.0059
P0.5 retina
GCTGCGGCTG
(
2
)
2
0.002
P2.5 retina
GCTGCGGCTG
(
2
)
3.5
0.0035
P2.5 retina
TGACATTGTC (
4
)
3.5
0.0035
P2.5 retina
CTTTGATGAT (
7
)
1.8
0.0018
P2.5 retina
GAAAAGAAAA
(
12
)
1.8
0.0018
P4.5 retina
GTGTGGTCCT
(
5
)
4
0.004
P4.5 retina
CCCTGTTCCT
(
3
)
2
0.002
P4.5 retina
CTTTGATGAT (
7
)
2
0.002
P4.5 retina
GAAAAGAAAA
(
12
)
2
0.002
P6.5 retina
CCCTGTTCCT
(
3
)
1.7
0.0017
P6.5 retina
GCTGCGGCTG
(
2
)
1.7
0.0017
P6.5 retina
TTTCCAGTGA (
5
)
1.7
0.0017
P10.5 crx- retina
CCCTGTTCCT
(
3
)
1.9
0.0019
P10.5 crx- retina
GTGTGGTCCT
(
5
)
1.9
0.0019
P10.5 crx- retina
TGACATTGTC (
4
)
1.9
0.0019
P10.5 crx- retina
TTTCCAGTGA (
5
)
1.9
0.0019
P10.5 crx+ retina
TGACATTGTC (
4
)
11.5
0.0115
P10.5 crx+ retina
GTGTGGTCCT
(
5
)
5.8
0.0058
P10.5 crx+ retina
CCCTGTTCCT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCTGCGGCTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTGTACAGCC
(
4
)
1.9
0.0019
Adult retinal
CCCTGTTCCT
(
3
)
11.1
0.0111
Adult retinal
GCTGCGGCTG
(
2
)
3.7
0.0037
Adult retinal
TGACATTGTC (
4
)
3.7
0.0037
Adult retinal
GTGTGGTCCT
(
5
)
1.9
0.0019
ONL
TGACATTGTC (
4
)
9.6
0.0096
ONL
CCCTGTTCCT
(
3
)
3.8
0.0038
ONL
GCTGCGGCTG
(
2
)
1.9
0.0019
