Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28969
Fmip
Fms interacting protein
11
107829
Mm.28969
A430085L24Rik
RIKEN cDNA A430085L24 gene
11
319676
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 81 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGGCAAAGC (
4
)
52.2
0.0522
P8 Cb GC
GGAAAAAAAA (
69
)
8.2
0.0082
P8 Cb GC
TGGTTCTTGA
(
7
)
3.3
0.0033
Cb medulloblastoma
GGAAAAAAAA (
69
)
41.6
0.0416
Cb medulloblastoma
TGGGCAAAGC (
4
)
37
0.037
Cb medulloblastoma
CAGCATTCAG (
4
)
11.6
0.0116
Cb medulloblastoma
GGAGAACCTT (
4
)
11.6
0.0116
Cb medulloblastoma
TCATTAAATC (
5
)
2.3
0.0023
P8 GC+1d culture
TGGGCAAAGC (
4
)
53.7
0.0537
P8 GC+1d culture
GGAAAAAAAA (
69
)
5.7
0.0057
P8 GC+1d culture
GGAGAACCTT (
4
)
3.4
0.0034
P8 GC+1d culture
TGGTTCTTGA
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGGCAAAGC (
4
)
85.5
0.0855
P8 GC+SHH+1d culture
GGAAAAAAAA (
69
)
7
0.007
P8 GC+SHH+1d culture
TGGTTCTTGA
(
7
)
3.5
0.0035
P8 GC+SHH+1d culture
GGAGAACCTT (
4
)
1.2
0.0012
3T3 fibroblasts
TGGGCAAAGC (
4
)
129.7
0.1297
3T3 fibroblasts
TGGTTCTTGA
(
7
)
3.5
0.0035
E15 cortex
TGGGCAAAGC (
4
)
153.4
0.1534
E15 cortex
GGAAAAAAAA (
69
)
9.9
0.0099
E15 cortex
GGAGAACCTT (
4
)
4.9
0.0049
P1 cortex
TGGGCAAAGC (
4
)
36.4
0.0364
P1 cortex
CAGCATTCAG (
4
)
9.1
0.0091
P1 cortex
GGAAAAAAAA (
69
)
4.5
0.0045
Hypothalamus
TGGGCAAAGC (
4
)
38
0.038
Hypothalamus
GGAAAAAAAA (
69
)
14.5
0.0145
Hypothalamus
GGAGAACCTT (
4
)
14.5
0.0145
Hypothalamus
TCATTAAATC (
5
)
1.8
0.0018
E12.5 retina
TGGGCAAAGC (
4
)
127.7
0.1277
E12.5 retina
GGAGAACCTT (
4
)
26.3
0.0263
E12.5 retina
TGGTTCTTGA
(
7
)
3.8
0.0038
E12.5 retina
GGAAAAAAAA (
69
)
1.9
0.0019
E14.5 retina
TGGGCAAAGC (
4
)
76.5
0.0765
E14.5 retina
GGAGAACCTT (
4
)
12.8
0.0128
E14.5 retina
GGAAAAAAAA (
69
)
10.9
0.0109
E14.5 retina
TGGTTCTTGA
(
7
)
7.3
0.0073
E16.5 retina
TGGGCAAAGC (
4
)
81.5
0.0815
E16.5 retina
GGAGAACCTT (
4
)
23.5
0.0235
E16.5 retina
TGGTTCTTGA
(
7
)
5.4
0.0054
E16.5 retina
CAGCATTCAG (
4
)
1.8
0.0018
E16.5 retina
GGAAAAAAAA (
69
)
1.8
0.0018
E18.5 retina
TGGGCAAAGC (
4
)
87.3
0.0873
E18.5 retina
GGAAAAAAAA (
69
)
16.4
0.0164
E18.5 retina
GGAGAACCTT (
4
)
10.9
0.0109
E18.5 retina
TGGTTCTTGA
(
7
)
3.6
0.0036
P0.5 retina
TGGGCAAAGC (
4
)
49.1
0.0491
P0.5 retina
GGAAAAAAAA (
69
)
13.7
0.0137
P0.5 retina
GGAGAACCTT (
4
)
11.8
0.0118
P2.5 retina
TGGGCAAAGC (
4
)
26.4
0.0264
P2.5 retina
GGAGAACCTT (
4
)
10.6
0.0106
P2.5 retina
GGAAAAAAAA (
69
)
7
0.007
P2.5 retina
TGGTTCTTGA
(
7
)
5.3
0.0053
P2.5 retina
TCATTAAATC (
5
)
3.5
0.0035
P2.5 retina
CAGCATTCAG (
4
)
1.8
0.0018
P4.5 retina
TGGGCAAAGC (
4
)
25.8
0.0258
P4.5 retina
GGAAAAAAAA (
69
)
13.9
0.0139
P4.5 retina
TGGTTCTTGA
(
7
)
11.9
0.0119
P4.5 retina
GGAGAACCTT (
4
)
9.9
0.0099
P4.5 retina
TCATTAAATC (
5
)
2
0.002
P6.5 retina
TGGGCAAAGC (
4
)
43.4
0.0434
P6.5 retina
GGAAAAAAAA (
69
)
13.3
0.0133
P6.5 retina
TGGTTCTTGA
(
7
)
10
0.01
P6.5 retina
GGAGAACCTT (
4
)
3.3
0.0033
P10.5 crx- retina
TGGGCAAAGC (
4
)
63.2
0.0632
P10.5 crx- retina
GGAGAACCTT (
4
)
13
0.013
P10.5 crx- retina
TGGTTCTTGA
(
7
)
5.6
0.0056
P10.5 crx- retina
CAGCATTCAG (
4
)
3.7
0.0037
P10.5 crx- retina
GGAAAAAAAA (
69
)
3.7
0.0037
P10.5 crx+ retina
TGGGCAAAGC (
4
)
69.2
0.0692
P10.5 crx+ retina
GGAGAACCTT (
4
)
32.7
0.0327
P10.5 crx+ retina
GGAAAAAAAA (
69
)
15.4
0.0154
P10.5 crx+ retina
TGGTTCTTGA
(
7
)
9.6
0.0096
Adult retinal
TGGGCAAAGC (
4
)
18.5
0.0185
Adult retinal
TGGTTCTTGA
(
7
)
14.8
0.0148
Adult retinal
GGAAAAAAAA (
69
)
5.6
0.0056
Adult retinal
GGAGAACCTT (
4
)
3.7
0.0037
Adult retinal
CAGCATTCAG (
4
)
1.9
0.0019
ONL
TGGGCAAAGC (
4
)
30.6
0.0306
ONL
GGAAAAAAAA (
69
)
17.2
0.0172
ONL
TGGTTCTTGA
(
7
)
9.6
0.0096
ONL
GGAGAACCTT (
4
)
1.9
0.0019
