Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289707	Fscn1	fascin homolog 1, actin bundling protein (Strongylocentrotus) purpuratus)	5	5 86.0 cM	14086
Gene Ontology	actin binding
Human Homolog	FSCN1[fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAGTAAGCT CATCTCACTC (2) CCTCGGAAAA (2) GCCAACCTTG GTGTTGAGGG TCTCTAAAAA (3) TTTGGGCTGC (3) 66.8 0.0668 Cb medulloblastoma CCTCGGAAAA (2) TCTCTAAAAA (3) TTTGGGCTGC (3) 27.7 0.0277 P8 GC+1d culture ATAGTAAGCT CCCCTGGAAA CCTCGGAAAA (2) GCCAACCTTG GGGAACTCTG (2) GTGTTGAGGG TCTCTAAAAA (3) TTTGGGCTGC (3) 55.9 0.0559 P8 GC+SHH+1d culture ATAGTAAGCT CCTCGGAAAA (2) GCCAACCTTG GGGAGCAGTG (2) GTGTTGAGGG TATGCATCAT TCTCTAAAAA (3) 51.5 0.0515 3T3 fibroblasts CCTCGGAAAA (2) GCCAACCTTG GTGTTGAGGG 87.6 0.0876 E15 cortex ATAGTAAGCT CCTCGGAAAA (2) GCCAACCTTG GGGAGCAGTG (2) GTGTTGAGGG TTTGGGCTGC (3) 123.6 0.1236 P1 cortex ATAGTAAGCT CCTCGGAAAA (2) GGGAACTCTG (2) GTGTTGAGGG TCTCTAAAAA (3) 45.3 0.0453 Hypothalamus ATAGTAAGCT CCCCTGGAAA CCTCGGAAAA (2) GGGAGCAGTG (2) TCTCTAAAAA (3) 27.2 0.0272 E12.5 retina ATAGTAAGCT CATCTCACTC (2) CCCCTGGAAA CCTCGGAAAA (2) GCCAACCTTG GTGTTGAGGG TATGCATCAT 105.2 0.1052 E14.5 retina ATAGTAAGCT CCTCGGAAAA (2) GTGTTGAGGG TATGCATCAT TCTCTAAAAA (3) 60 0.06 E16.5 retina ATAGTAAGCT ATTACGCCAA CCTCGGAAAA (2) GCCAACCTTG GTGTTGAGGG 79.6 0.0796 E18.5 retina ATAGTAAGCT CCTCGGAAAA (2) GTGTTGAGGG TATGCATCAT TCTCTAAAAA (3) 56.3 0.0563 P0.5 retina ATAGTAAGCT ATTACGCCAA CCTCGGAAAA (2) GCCAACCTTG GGGAACTCTG (2) GTGTTGAGGG 74.7 0.0747 P2.5 retina ATAGTAAGCT CATCTCACTC (2) CCTCGGAAAA (2) GCCAACCTTG GGGAACTCTG (2) GTGTTGAGGG TCTCTAAAAA (3) 68.8 0.0688 P4.5 retina ATAGTAAGCT CCTCGGAAAA (2) TCTCTAAAAA (3) TTTGGGCTGC (3) 57.6 0.0576 P6.5 retina ATAGTAAGCT CATCTCACTC (2) CCTCGGAAAA (2) GGGAACTCTG (2) GTGTTGAGGG TCTCTAAAAA (3) TTTGGGCTGC (3) 65 0.065 P10.5 crx- retina ATAGTAAGCT CCTCGGAAAA (2) GTGTTGAGGG TCTCTAAAAA (3) 33.5 0.0335 P10.5 crx+ retina ATAGTAAGCT CATCTCACTC (2) CCTCGGAAAA (2) GTGTTGAGGG TCTCTAAAAA (3) 30.8 0.0308 Adult retinal ATAGTAAGCT ATTACGCCAA CCTCGGAAAA (2) GCCAACCTTG 24.1 0.0241 ONL CCTCGGAAAA (2) GTGTTGAGGG 24.9 0.0249