Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289800	Eif3s3	eukaryotic translation initiation factor 3, subunit 3 (gamma)	15		68135
Gene Ontology	eukaryotic translation initiation factor 3 complex | protein biosynthesis | regulation of translational initiation | translation factor activity, nucleic acid binding | translation initiation factor activity
Human Homolog	EIF3S3[eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 153 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCAGGCTC (3) 39.2 0.0392 P8 Cb GC GCCCAGGTTT (3) 17.9 0.0179 P8 Cb GC ATGGCCAAAA (8) 8.2 0.0082 P8 Cb GC TTTTGAAAAA (6) 3.3 0.0033 P8 Cb GC CCCAGGCTCT (10) 1.6 0.0016 P8 Cb GC CGCAACACCA (4) 1.6 0.0016 P8 Cb GC TTTGAAAAAA (5) 1.6 0.0016 Cb medulloblastoma GCCCAGGTTT (3) 25.4 0.0254 Cb medulloblastoma GCCCAGGCTC (3) 13.9 0.0139 Cb medulloblastoma AGCCAGGACA (6) 2.3 0.0023 Cb medulloblastoma CCCAGGCTCT (10) 2.3 0.0023 Cb medulloblastoma CGCAACACCA (4) 2.3 0.0023 Cb medulloblastoma TTTGAAAAAA (5) 2.3 0.0023 P8 GC+1d culture GCCCAGGCTC (3) 25.1 0.0251 P8 GC+1d culture GCCCAGGTTT (3) 22.8 0.0228 P8 GC+1d culture CCCAGGCTCT (10) 5.7 0.0057 P8 GC+1d culture CCCCAACCCC (7) 4.6 0.0046 P8 GC+1d culture GCCCAGGGGC (4) 4.6 0.0046 P8 GC+1d culture TTTTGAAAAA (6) 4.6 0.0046 P8 GC+1d culture CGCAACACCA (4) 3.4 0.0034 P8 GC+1d culture AAAATTTTGG (4) 1.1 0.0011 P8 GC+1d culture AAGAGTTTGC 1.1 0.0011 P8 GC+1d culture ATGGCCAAAA (8) 1.1 0.0011 P8 GC+1d culture TCCCCAACAC (3) 1.1 0.0011 P8 GC+1d culture TTTCCAGCCA (2) 1.1 0.0011 P8 GC+SHH+1d culture GCCCAGGCTC (3) 26.9 0.0269 P8 GC+SHH+1d culture GCCCAGGTTT (3) 16.4 0.0164 P8 GC+SHH+1d culture TTTTGAAAAA (6) 8.2 0.0082 P8 GC+SHH+1d culture TTTGAAAAAA (5) 4.7 0.0047 P8 GC+SHH+1d culture CCCAGGCTCT (10) 3.5 0.0035 P8 GC+SHH+1d culture CCCCAACCCC (7) 3.5 0.0035 P8 GC+SHH+1d culture GCCCAGGGGC (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTGAAAGAA (2) 1.2 0.0012 3T3 fibroblasts GCCCAGGCTC (3) 49.1 0.0491 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CCCAGGCTCT (10) 7 0.007 3T3 fibroblasts CCCCAACCCC (7) 3.5 0.0035 3T3 fibroblasts GGCCCCAGGG (7) 3.5 0.0035 3T3 fibroblasts TCCCCAACAC (3) 3.5 0.0035 E15 cortex GCCCAGGCTC (3) 39.6 0.0396 E15 cortex GCCCAGGTTT (3) 9.9 0.0099 E15 cortex CCCAGGCTCT (10) 4.9 0.0049 E15 cortex CCCCAACCCC (7) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CCCCAACCCC (7) 13.6 0.0136 P1 cortex CGCAACACCA (4) 4.5 0.0045 P1 cortex GCCCAGGTTT (3) 4.5 0.0045 P1 cortex TCAACATTGA 4.5 0.0045 Hypothalamus GCCCAGGTTT (3) 16.3 0.0163 Hypothalamus GCCCAGGCTC (3) 9.1 0.0091 Hypothalamus GCCCAGGGGC (4) 3.6 0.0036 Hypothalamus AAGAGTTTGC 1.8 0.0018 Hypothalamus CCCAGGCTCT (10) 1.8 0.0018 Hypothalamus CGCACACAGT 1.8 0.0018 Hypothalamus TTTGAAAAAA (5) 1.8 0.0018 Hypothalamus TTTGAAAGAA (2) 1.8 0.0018 Hypothalamus TTTTGAAAAA (6) 1.8 0.0018 E12.5 retina GCCCAGGCTC (3) 18.8 0.0188 E12.5 retina GCCCAGGTTT (3) 7.5 0.0075 E12.5 retina TTTTGAAAAA (6) 3.8 0.0038 E12.5 retina CCCAGGCTCT (10) 1.9 0.0019 E12.5 retina TCCCCAACAC (3) 1.9 0.0019 E12.5 retina TTTGAAAAAA (5) 1.9 0.0019 E12.5 retina TTTGAAAGAA (2) 1.9 0.0019 E14.5 retina GCCCAGGCTC (3) 14.6 0.0146 E14.5 retina GCCCAGGTTT (3) 10.9 0.0109 E14.5 retina TTTTGAAAAA (6) 5.5 0.0055 E14.5 retina TCCCCAACAC (3) 3.6 0.0036 E14.5 retina AAGAGTTTGC 1.8 0.0018 E14.5 retina CCCAGGCTCT (10) 1.8 0.0018 E14.5 retina CGCACACAGT 1.8 0.0018 E14.5 retina TTTGAAAAAA (5) 1.8 0.0018 E16.5 retina GCCCAGGCTC (3) 21.7 0.0217 E16.5 retina GCCCAGGTTT (3) 12.7 0.0127 E16.5 retina CGCAACACCA (4) 9.1 0.0091 E16.5 retina TTTTGAAAAA (6) 9.1 0.0091 E16.5 retina CCCAGGCTCT (10) 5.4 0.0054 E16.5 retina AAGAGTTTGC 3.6 0.0036 E16.5 retina AGCCAGGACA (6) 1.8 0.0018 E16.5 retina CGCACACAGT 1.8 0.0018 E16.5 retina GGCCCCAGGG (7) 1.8 0.0018 E16.5 retina TCAACATTGA 1.8 0.0018 E16.5 retina TTTGAAAAAA (5) 1.8 0.0018 E18.5 retina GCCCAGGCTC (3) 20 0.02 E18.5 retina GCCCAGGTTT (3) 18.2 0.0182 E18.5 retina TTTGAAAAAA (5) 3.6 0.0036 E18.5 retina TTTTGAAAAA (6) 3.6 0.0036 E18.5 retina CCCCAACCCC (7) 1.8 0.0018 E18.5 retina GCCCAGGGGC (4) 1.8 0.0018 P0.5 retina GCCCAGGCTC (3) 29.4 0.0294 P0.5 retina CCCCAACCCC (7) 5.9 0.0059 P0.5 retina GCCCAGGTTT (3) 5.9 0.0059 P0.5 retina AAGAGTTTGC 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TTTCCAGCCA (2) 3.9 0.0039 P0.5 retina CCCAGGCTCT (10) 2 0.002 P2.5 retina GCCCAGGTTT (3) 21.1 0.0211 P2.5 retina GCCCAGGCTC (3) 19.4 0.0194 P2.5 retina CCCAGGCTCT (10) 3.5 0.0035 P2.5 retina TTTCCAGCCA (2) 3.5 0.0035 P2.5 retina TTTTGAAAAA (6) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TCCCCAACAC (3) 1.8 0.0018 P2.5 retina TTTGAAAAAA (5) 1.8 0.0018 P4.5 retina GCCCAGGTTT (3) 17.8 0.0178 P4.5 retina GCCCAGGCTC (3) 13.9 0.0139 P4.5 retina TTTTGAAAAA (6) 9.9 0.0099 P4.5 retina CCCCAACCCC (7) 4 0.004 P4.5 retina CCAGGATGGA 2 0.002 P4.5 retina GCCCAGGGGC (4) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTTGAAAAAA (5) 2 0.002 P4.5 retina TTTGAAAGAA (2) 2 0.002 P6.5 retina GCCCAGGCTC (3) 15 0.015 P6.5 retina GCCCAGGTTT (3) 15 0.015 P6.5 retina CCAGGATGGA 3.3 0.0033 P6.5 retina CCCAGGCTCT (10) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TCCCCAACAC (3) 3.3 0.0033 P6.5 retina TTTCCAGCCA (2) 3.3 0.0033 P6.5 retina TTTTGAAAAA (6) 3.3 0.0033 P6.5 retina AAGAGTTTGC 1.7 0.0017 P6.5 retina TACGTGTTGT 1.7 0.0017 P6.5 retina TTTGAAAAAA (5) 1.7 0.0017 P10.5 crx- retina GCCCAGGCTC (3) 55.7 0.0557 P10.5 crx- retina CCCAGGCTCT (10) 9.3 0.0093 P10.5 crx- retina GCCCAGGTTT (3) 7.4 0.0074 P10.5 crx- retina TTTTGAAAAA (6) 3.7 0.0037 P10.5 crx- retina CCCCAACCCC (7) 1.9 0.0019 P10.5 crx- retina GCCCAGGGGC (4) 1.9 0.0019 P10.5 crx- retina TCAACATTGA 1.9 0.0019 P10.5 crx- retina TCCCCAACAC (3) 1.9 0.0019 P10.5 crx+ retina GCCCAGGCTC (3) 25 0.025 P10.5 crx+ retina GCCCAGGTTT (3) 15.4 0.0154 P10.5 crx+ retina CCCAGGCTCT (10) 9.6 0.0096 P10.5 crx+ retina AGCCAGGACA (6) 1.9 0.0019 P10.5 crx+ retina CGCAACACCA (4) 1.9 0.0019 Adult retinal CCCAGGCTCT (10) 13 0.013 Adult retinal CCCCAACCCC (7) 5.6 0.0056 Adult retinal GCCCAGGCTC (3) 5.6 0.0056 Adult retinal GCCCAGGTTT (3) 5.6 0.0056 Adult retinal AAGAGTTTGC 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TTTGAAAAAA (5) 1.9 0.0019 Adult retinal TTTTGAAAAA (6) 1.9 0.0019 ONL GCCCAGGTTT (3) 13.4 0.0134 ONL GCCCAGGCTC (3) 9.6 0.0096 ONL TTTGAAAAAA (5) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAAATTTTGG (4) 3.8 0.0038 ONL TTTTGAAAAA (6) 3.8 0.0038 ONL GGCCCCAGGG (7) 1.9 0.0019 ONL TACGTGTTGT 1.9 0.0019