Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289914	D1Ertd396e	DNA segment, Chr 1, ERATO Doi 396, expressed	1	1 103.4 cM	52477
Gene Ontology	endonuclease activity | exonuclease activity
Human Homolog	LOC90806[similar to RIKEN cDNA 2610307I21]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCGCTTGCAC 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AAACCCTATC (3) 3.3 0.0033 P8 Cb GC GGCACCCTGC (2) 3.3 0.0033 P8 Cb GC AAACCCTATT (5) 1.6 0.0016 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC TAGCCCAGGC (30) 1.6 0.0016 P8 Cb GC TATAGCACTT 1.6 0.0016 P8 Cb GC TTAGAGGCAA 1.6 0.0016 Cb medulloblastoma AAAAACATAA (5) 4.6 0.0046 Cb medulloblastoma TAGCCCAGGC (30) 4.6 0.0046 Cb medulloblastoma GCGCTTGCAC 2.3 0.0023 Cb medulloblastoma TTAGAGGCAA 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GCGCTTGCAC 3.4 0.0034 P8 GC+1d culture AAAAACATAA (5) 2.3 0.0023 P8 GC+1d culture AAACCCTATC (3) 2.3 0.0023 P8 GC+1d culture AAACCCTATT (5) 1.1 0.0011 P8 GC+1d culture TAGCCCAGGC (30) 1.1 0.0011 P8 GC+1d culture TATAGCACTT 1.1 0.0011 P8 GC+1d culture TTAGAGGCAA 1.1 0.0011 P8 GC+SHH+1d culture TAGCCCAGGC (30) 8.2 0.0082 P8 GC+SHH+1d culture AAAAACATAA (5) 7 0.007 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture AAACCCTATC (3) 4.7 0.0047 P8 GC+SHH+1d culture GCGCTTGCAC 3.5 0.0035 P8 GC+SHH+1d culture ATAAAGAAAA (11) 1.2 0.0012 P8 GC+SHH+1d culture TATAGCACTT 1.2 0.0012 P8 GC+SHH+1d culture TTGAGGAAAT (2) 1.2 0.0012 3T3 fibroblasts TAGCCCAGGC (30) 14 0.014 3T3 fibroblasts GCGCTTGCAC 3.5 0.0035 E15 cortex TAGCCCAGGC (30) 24.7 0.0247 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AAACCCTATC (3) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AAACCCTATC (3) 9.1 0.0091 Hypothalamus TAGCCCAGGC (30) 7.2 0.0072 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus AAAAACATAA (5) 5.4 0.0054 Hypothalamus CTGAGCTTGG (2) 1.8 0.0018 Hypothalamus GCGCTTGCAC 1.8 0.0018 Hypothalamus TTGAGGAAAT (2) 1.8 0.0018 E12.5 retina TAGCCCAGGC (30) 7.5 0.0075 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GCGCTTGCAC 5.6 0.0056 E12.5 retina AAACCCTATC (3) 3.8 0.0038 E12.5 retina TATAGCACTT 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TAGCCCAGGC (30) 12.8 0.0128 E14.5 retina AAACCCTATC (3) 10.9 0.0109 E14.5 retina ATAAAGAAAA (11) 1.8 0.0018 E14.5 retina GCGCTTGCAC 1.8 0.0018 E16.5 retina TAGCCCAGGC (30) 7.2 0.0072 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina TATAGCACTT 3.6 0.0036 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina AAACCCTATC (3) 7.3 0.0073 E18.5 retina TAGCCCAGGC (30) 7.3 0.0073 E18.5 retina AAACCCTATT (5) 1.8 0.0018 E18.5 retina CTGAGCTTGG (2) 1.8 0.0018 E18.5 retina GCGCTTGCAC 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TAGCCCAGGC (30) 5.9 0.0059 P0.5 retina AAACCCTATC (3) 3.9 0.0039 P0.5 retina GCGCTTGCAC 2 0.002 P2.5 retina TAGCCCAGGC (30) 8.8 0.0088 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina AAACCCTATC (3) 3.5 0.0035 P2.5 retina ATAAAGAAAA (11) 3.5 0.0035 P2.5 retina CTGAGCTTGG (2) 1.8 0.0018 P2.5 retina GCGCTTGCAC 1.8 0.0018 P2.5 retina TATAGCACTT 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina AAACCCTATC (3) 7.9 0.0079 P4.5 retina CTGAGCTTGG (2) 4 0.004 P4.5 retina AAAAACATAA (5) 2 0.002 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina GCGCTTGCAC 2 0.002 P4.5 retina TAGCCCAGGC (30) 2 0.002 P6.5 retina AAACCCTATC (3) 11.7 0.0117 P6.5 retina GCGCTTGCAC 8.3 0.0083 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TAGCCCAGGC (30) 5 0.005 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina CTGAGCTTGG (2) 1.7 0.0017 P6.5 retina GGCACCCTGC (2) 1.7 0.0017 P6.5 retina TATAGCACTT 1.7 0.0017 P10.5 crx- retina GCGCTTGCAC 5.6 0.0056 P10.5 crx- retina TAGCCCAGGC (30) 1.9 0.0019 P10.5 crx- retina TATAGCACTT 1.9 0.0019 P10.5 crx- retina TTAGAGGCAA 1.9 0.0019 P10.5 crx+ retina AAACCCTATC (3) 3.8 0.0038 P10.5 crx+ retina GCGCTTGCAC 3.8 0.0038 P10.5 crx+ retina TAGCCCAGGC (30) 3.8 0.0038 P10.5 crx+ retina TATAGCACTT 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GCGCTTGCAC 3.7 0.0037 Adult retinal ATAAAGAAAA (11) 1.9 0.0019 Adult retinal TAGCCCAGGC (30) 1.9 0.0019 Adult retinal TATAGCACTT 1.9 0.0019 ONL TAGCCCAGGC (30) 9.6 0.0096 ONL ATTCCGAATT (107) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AAAAACATAA (5) 1.9 0.0019 ONL AAACCCTATC (3) 1.9 0.0019 ONL CTGAGCTTGG (2) 1.9 0.0019 ONL TATAGCACTT 1.9 0.0019