Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29003
4930507C10Rik
RIKEN cDNA 4930507C10 gene
1
78772
Human Homolog
FLJ13840[hypothetical protein FLJ13840]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCAGGAGA (
4
)
4.9
0.0049
P8 Cb GC
TTTCAGCCAG
(
2
)
1.6
0.0016
Cb medulloblastoma
AAGCAGGAGA (
4
)
23.1
0.0231
Cb medulloblastoma
TTTCAGCCAG
(
2
)
2.3
0.0023
P8 GC+1d culture
AAGCAGGAGA (
4
)
13.7
0.0137
P8 GC+1d culture
GCAAAGATGG
1.1
0.0011
P8 GC+1d culture
TTTCAGCCAG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGCAGGAGA (
4
)
11.7
0.0117
P8 GC+SHH+1d culture
TTTCAGCCAG
(
2
)
2.3
0.0023
3T3 fibroblasts
TTTCAGCCAG
(
2
)
28
0.028
3T3 fibroblasts
CTGACCTCCA (
4
)
3.5
0.0035
E15 cortex
AAGCAGGAGA (
4
)
4.9
0.0049
E15 cortex
TTTCAGCCAG
(
2
)
4.9
0.0049
P1 cortex
AAGCAGGAGA (
4
)
4.5
0.0045
Hypothalamus
AAGCAGGAGA (
4
)
7.2
0.0072
E12.5 retina
AAGCAGGAGA (
4
)
3.8
0.0038
E12.5 retina
GCAAAGATGG
1.9
0.0019
E14.5 retina
CTGACCTCCA (
4
)
25.5
0.0255
E14.5 retina
AAGCAGGAGA (
4
)
5.5
0.0055
E16.5 retina
TTTCAGCCAG
(
2
)
3.6
0.0036
E16.5 retina
GCAAAGATGG
1.8
0.0018
E18.5 retina
AAGCAGGAGA (
4
)
7.3
0.0073
E18.5 retina
CTGACCTCCA (
4
)
5.5
0.0055
P0.5 retina
AAGCAGGAGA (
4
)
3.9
0.0039
P0.5 retina
TTTCAGCCAG
(
2
)
2
0.002
P2.5 retina
AAGCAGGAGA (
4
)
3.5
0.0035
P2.5 retina
GTCCAGCGCT (
3
)
1.8
0.0018
P4.5 retina
AAGCAGGAGA (
4
)
9.9
0.0099
P4.5 retina
GCAAAGATGG
2
0.002
P6.5 retina
AAGCAGGAGA (
4
)
5
0.005
P6.5 retina
TTTCAGCCAG
(
2
)
5
0.005
P10.5 crx- retina
AAGCAGGAGA (
4
)
3.7
0.0037
P10.5 crx- retina
GTCCAGCGCT (
3
)
3.7
0.0037
P10.5 crx- retina
TTTCAGCCAG
(
2
)
3.7
0.0037
P10.5 crx+ retina
AAGCAGGAGA (
4
)
13.5
0.0135
Adult retinal
AAGCAGGAGA (
4
)
3.7
0.0037
ONL
CTGACCTCCA (
4
)
11.5
0.0115
ONL
AAGCAGGAGA (
4
)
3.8
0.0038
