Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290070	Trappc6b	trafficking protein particle complex 6B	12		78232
Gene Ontology	endoplasmic reticulum | Golgi apparatus | transport
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTACTGTC (2) 14.7 0.0147 Cb medulloblastoma CATTACTGTC (2) 23.1 0.0231 Cb medulloblastoma ACAGAAACTG (2) 2.3 0.0023 P8 GC+1d culture CATTACTGTC (2) 11.4 0.0114 P8 GC+1d culture ACAGAAACTG (2) 1.1 0.0011 P8 GC+1d culture GTCAAAGGAC 1.1 0.0011 P8 GC+SHH+1d culture CATTACTGTC (2) 10.5 0.0105 P8 GC+SHH+1d culture TATTTATATA (3) 1.2 0.0012 E15 cortex CATTACTGTC (2) 4.9 0.0049 P1 cortex CATTACTGTC (2) 18.2 0.0182 P1 cortex TATTTATATA (3) 9.1 0.0091 Hypothalamus CATTACTGTC (2) 18.1 0.0181 Hypothalamus GTCAAAGGAC 1.8 0.0018 E12.5 retina CATTACTGTC (2) 3.8 0.0038 E12.5 retina ACAGAAACTG (2) 1.9 0.0019 E14.5 retina CATTACTGTC (2) 16.4 0.0164 E14.5 retina TGGCTTAATC (3) 3.6 0.0036 E16.5 retina CATTACTGTC (2) 7.2 0.0072 E16.5 retina TATTTATATA (3) 1.8 0.0018 E18.5 retina CATTACTGTC (2) 18.2 0.0182 E18.5 retina TATTTATATA (3) 1.8 0.0018 P0.5 retina CATTACTGTC (2) 9.8 0.0098 P2.5 retina CATTACTGTC (2) 7 0.007 P4.5 retina CATTACTGTC (2) 2 0.002 P4.5 retina GTCAAAGGAC 2 0.002 P6.5 retina CATTACTGTC (2) 15 0.015 P10.5 crx- retina CATTACTGTC (2) 11.1 0.0111 P10.5 crx- retina ACAGAAACTG (2) 3.7 0.0037 P10.5 crx+ retina CATTACTGTC (2) 23.1 0.0231 P10.5 crx+ retina TATTTATATA (3) 5.8 0.0058 P10.5 crx+ retina TGGCTTAATC (3) 1.9 0.0019 Adult retinal CATTACTGTC (2) 18.5 0.0185 ONL CATTACTGTC (2) 3.8 0.0038