Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290116
BC004004
cDNA sequence BC004004
17
80748
Human Homolog
C6orf89[chromosome 6 open reading frame 89]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCGATAGAGT
GATCTTGCTG
(
3
)
TAGACCAGAC
(
2
)
9.8
0.0098
P8 GC+1d culture
CCGATAGAGT
GATCTTGCTG
(
3
)
TAGACCAGAC
(
2
)
6.8
0.0068
P8 GC+SHH+1d culture
AGTTCGAGGC
CCGATAGAGT
GATCTTGCTG
(
3
)
TAGACCAGAC
(
2
)
8.2
0.0082
3T3 fibroblasts
CCGATAGAGT
10.5
0.0105
E15 cortex
AGTTCGAGGC
CCGATAGAGT
TAGACCAGAC
(
2
)
19.7
0.0197
Hypothalamus
CCGATAGAGT
GACTGACTGT
GATCTTGCTG
(
3
)
TAGACCAGAC
(
2
)
9
0.009
E12.5 retina
AGTTCGAGGC
CCGATAGAGT
3.8
0.0038
E14.5 retina
AGTTCGAGGC
1.8
0.0018
E16.5 retina
AGTTCGAGGC
CCGATAGAGT
3.6
0.0036
P0.5 retina
CCGATAGAGT
GATCTTGCTG
(
3
)
4
0.004
P2.5 retina
CCGATAGAGT
TAGACCAGAC
(
2
)
5.3
0.0053
P4.5 retina
TAGACCAGAC
(
2
)
2
0.002
P6.5 retina
AGTTCGAGGC
CCGATAGAGT
GATCTTGCTG
(
3
)
TAGACCAGAC
(
2
)
10.1
0.0101
P10.5 crx- retina
CCGATAGAGT
GATCTTGCTG
(
3
)
14.8
0.0148
P10.5 crx+ retina
CCGATAGAGT
GACTGACTGT
GATCTTGCTG
(
3
)
9.6
0.0096
Adult retinal
CCGATAGAGT
11.1
0.0111
ONL
CCGATAGAGT
GACTGACTGT
5.7
0.0057
