Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290251	Cnbp1	cellular nucleic acid binding protein 1	6	6 D1	12785
Gene Ontology	cholesterol biosynthesis | cytosol | DNA binding | endoplasmic reticulum | nucleic acid binding | nucleus | positive regulation of cell proliferation | positive regulation of transcription from Pol II promoter | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	ZNF9[zinc finger protein 9 (a cellular retroviral nucleic acid binding protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCACAGAGGC (2) GCCCGCCAGG GGGGGGAGGG (5) TACCATCAAT TAGGAGGTAA TTAATACATA 27.6 0.0276 Cb medulloblastoma GCCCGCCAGG TAGCCATCAA TAGGAGGTAA TAGGCATCCA (4) 16.1 0.0161 P8 GC+1d culture CCACAGAGGC (2) GGAACACACT TACCATCAAT TAGCCATCCA (2) TAGGAGGTAA TTAATACATA 18.1 0.0181 P8 GC+SHH+1d culture CCACAGAGGC (2) GGAACACACT TACCATCAAT TAGGAGGTAA 24.6 0.0246 3T3 fibroblasts GCCCGCCAGG TAGGAGGTAA TGGGTGCTTG 17.5 0.0175 E15 cortex GCCCGCCAGG TAGGAGGTAA 44.5 0.0445 P1 cortex TAGGAGGTAA TGGGTGCTTG 9 0.009 Hypothalamus GCCCGCCAGG TAGCCATCAA TAGGAGGTAA TGGGTGCTTG 25.3 0.0253 E12.5 retina GCCCGCCAGG GGAACACACT GTCACTGGGA (2) TAGCCATCCA (2) TAGGAGGTAA TTTTACGTTT 22.6 0.0226 E14.5 retina GCCCGCCAGG GGAACACACT GTCACTGGGA (2) TAGGAGGTAA TAGGCATCCA (4) 18.1 0.0181 E16.5 retina CCACAGAGGC (2) GTCACTGGGA (2) TAGCCATCCA (2) TAGGAGGTAA TGGGTGCTTG 18 0.018 E18.5 retina GCCCGCCAGG GGGGGGAGGG (5) GTCACTGGGA (2) TACCATCAAT TAGCCATCCA (2) TAGGAGGTAA 25.5 0.0255 P0.5 retina GGAACACACT TAGCCATCAA TAGGAGGTAA TTCACAGAGA (2) 35.3 0.0353 P2.5 retina CCACAGAGGC (2) GCCCGCCAGG GGGGGGAGGG (5) TAGGAGGTAA TTAATACATA 15.9 0.0159 P4.5 retina GCCCGCCAGG GGGGGGAGGG (5) GTCACTGGGA (2) TAGGAGGTAA TGGGTGCTTG TTAATACATA TTCACAGAGA (2) TTTTACGTTT 25.9 0.0259 P6.5 retina AGCAGCAATG GCCCGCCAGG GTCACTGGGA (2) TAGCCATCAA TAGGAGGTAA TTCACAGAGA (2) 26.7 0.0267 P10.5 crx- retina GGAACACACT TAACTACAAC TAGGAGGTAA TTTTACGTTT 27.9 0.0279 P10.5 crx+ retina GCCCGCCAGG GGGGGGAGGG (5) GTCACTGGGA (2) TAACTACAAC 9.5 0.0095 Adult retinal AGCAGCAATG GGAACACACT TAGGAGGTAA TTAATACATA TTCACAGAGA (2) 26.1 0.0261 ONL GGAACACACT GGGGGGAGGG (5) TAGCCATCCA (2) TAGGAGGTAA TAGGCATCCA (4) TGGGTGCTTG 13.3 0.0133