Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29027	Sparcl1	SPARC-like 1 (mast9, hevin)	5	5 E4 (5 55.0 cM)	13602
Gene Ontology	calcium ion binding | extracellular matrix | extracellular space
Human Homolog	SPARCL1[SPARC-like 1 (mast9, hevin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAGGAAGT 48.9 0.0489 P8 Cb GC CATTAAGCTG 8.2 0.0082 P8 Cb GC GCGGCTATCT 4.9 0.0049 P8 Cb GC GAACACTGCA 1.6 0.0016 P8 Cb GC TGAGAGAAGA (2) 1.6 0.0016 Cb medulloblastoma CTGAGGAAGT 150.3 0.1503 Cb medulloblastoma GCGGCTATCT 6.9 0.0069 Cb medulloblastoma GAACACTGCA 2.3 0.0023 Cb medulloblastoma GTGGCTAACT 2.3 0.0023 P8 GC+1d culture CTGAGGAAGT 9.1 0.0091 P8 GC+1d culture CATTAAGCTG 3.4 0.0034 P8 GC+1d culture GCGGCTATCT 2.3 0.0023 P8 GC+SHH+1d culture CTGAGGAAGT 9.4 0.0094 P8 GC+SHH+1d culture AAAGCTGTGC (2) 1.2 0.0012 P8 GC+SHH+1d culture CATTAAGCTG 1.2 0.0012 P8 GC+SHH+1d culture TGCTAAGTCC (2) 1.2 0.0012 E15 cortex CTGAGGAAGT 9.9 0.0099 P1 cortex CTGAGGAAGT 27.3 0.0273 Hypothalamus CTGAGGAAGT 115.9 0.1159 Hypothalamus TGAGAGAAGA (2) 7.2 0.0072 Hypothalamus TTGTGAACAC 3.6 0.0036 Hypothalamus CATTAAGCTG 1.8 0.0018 Hypothalamus GTGGCTAACT 1.8 0.0018 Hypothalamus TGCTAAGTCC (2) 1.8 0.0018 E12.5 retina CATTAAGCTG 5.6 0.0056 E12.5 retina AAAGCTGTGC (2) 1.9 0.0019 E14.5 retina TTGTGAACAC 1.8 0.0018 E16.5 retina CTGAGGAAGT 1.8 0.0018 E18.5 retina GAACACTGCA 5.5 0.0055 P0.5 retina GAAATGCAAT 2 0.002 P2.5 retina CTGAGGAAGT 5.3 0.0053 P2.5 retina CATTAAGCTG 1.8 0.0018 P6.5 retina CTGAGGAAGT 6.7 0.0067 P6.5 retina AAAGCTGTGC (2) 1.7 0.0017 P6.5 retina GAAATGCAAT 1.7 0.0017 P10.5 crx- retina CTGAGGAAGT 29.7 0.0297 P10.5 crx- retina GTGGCTAACT 1.9 0.0019 P10.5 crx- retina TGAGAGAAGA (2) 1.9 0.0019 P10.5 crx+ retina CTGAGGAAGT 28.8 0.0288 Adult retinal CTGAGGAAGT 24.1 0.0241 Adult retinal GAAATGCAAT 1.9 0.0019 Adult retinal GAACACTGCA 1.9 0.0019 Adult retinal TGCTAAGTCC (2) 1.9 0.0019 Adult retinal TTGTGAACAC 1.9 0.0019 ONL CTGAGGAAGT 5.7 0.0057 ONL AAAGCTGTGC (2) 1.9 0.0019 ONL CATTAAGCTG 1.9 0.0019 ONL GTGGCTAACT 1.9 0.0019 ONL TTGTGAACAC 1.9 0.0019