Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29037	Nubp1	nucleotide binding protein 1	16	16 3.4 cM	26425
Gene Ontology	ATP binding | nucleotide binding
Human Homolog	NUBP1[nucleotide binding protein 1 (MinD homolog, E. coli)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTCATA (21) 22.8 0.0228 P8 Cb GC GGCTTAGAAG (2) 1.6 0.0016 P8 Cb GC TGGCTTAAGT 1.6 0.0016 Cb medulloblastoma GTGGCTCATA (21) 23.1 0.0231 Cb medulloblastoma CTGAGACCCT 2.3 0.0023 P8 GC+1d culture GTGGCTCATA (21) 26.3 0.0263 P8 GC+1d culture ACTGTCCCAA 1.1 0.0011 P8 GC+1d culture CTGAGACCCT 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTCATA (21) 24.6 0.0246 P8 GC+SHH+1d culture CTGAGACCCT 3.5 0.0035 3T3 fibroblasts GTGGCTCATA (21) 24.5 0.0245 3T3 fibroblasts CTGAGACCCT 10.5 0.0105 E15 cortex GTGGCTCATA (21) 39.6 0.0396 E15 cortex GCCTCTGCAC (2) 4.9 0.0049 E15 cortex TGGCTTAAGT 4.9 0.0049 P1 cortex GTGGCTCATA (21) 27.3 0.0273 P1 cortex TGGCTTAAGT 9.1 0.0091 P1 cortex GGCTTAGAAG (2) 4.5 0.0045 Hypothalamus GTGGCTCATA (21) 30.8 0.0308 Hypothalamus GCCTCTGCAC (2) 1.8 0.0018 E12.5 retina GTGGCTCATA (21) 82.6 0.0826 E12.5 retina CTGAGACCCT 1.9 0.0019 E12.5 retina GCCTCTGCAC (2) 1.9 0.0019 E12.5 retina TGGCTTAAGT 1.9 0.0019 E14.5 retina GTGGCTCATA (21) 49.2 0.0492 E14.5 retina GTGAGCAGCC (2) 1.8 0.0018 E14.5 retina TGGCTTAAGT 1.8 0.0018 E16.5 retina GTGGCTCATA (21) 34.4 0.0344 E16.5 retina ACTGTCCCAA 1.8 0.0018 E16.5 retina TGGCTTAAGT 1.8 0.0018 E18.5 retina GTGGCTCATA (21) 47.3 0.0473 E18.5 retina TGGCTTAAGT 1.8 0.0018 P0.5 retina GTGGCTCATA (21) 41.2 0.0412 P0.5 retina TGGCTTAAGT 3.9 0.0039 P0.5 retina GGCTTAGAAG (2) 2 0.002 P0.5 retina GTGAGCAGCC (2) 2 0.002 P2.5 retina GTGGCTCATA (21) 49.3 0.0493 P4.5 retina GTGGCTCATA (21) 53.5 0.0535 P4.5 retina GCCTCTGCAC (2) 2 0.002 P6.5 retina GTGGCTCATA (21) 33.3 0.0333 P6.5 retina GCCTCTGCAC (2) 1.7 0.0017 P10.5 crx- retina GTGGCTCATA (21) 33.4 0.0334 P10.5 crx- retina CTGAGACCCT 3.7 0.0037 P10.5 crx- retina GCCTCTGCAC (2) 3.7 0.0037 P10.5 crx- retina TGGCTTAAGT 1.9 0.0019 P10.5 crx+ retina GTGGCTCATA (21) 38.4 0.0384 P10.5 crx+ retina ACTGTCCCAA 3.8 0.0038 P10.5 crx+ retina GCCTCTGCAC (2) 3.8 0.0038 Adult retinal GTGGCTCATA (21) 24.1 0.0241 Adult retinal GTGAGCAGCC (2) 1.9 0.0019 ONL GTGGCTCATA (21) 49.8 0.0498 ONL CTGAGACCCT 3.8 0.0038