Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290429
Sh3tc1
SH3 domain and tetratricopeptide repeats 1
5
231147
Human Homolog
SH3TC1[SH3 domain and tetratricopeptide repeats 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGGCCTTGGC
(
2
)
CCCAGCTCTT
(
2
)
4.9
0.0049
Cb medulloblastoma
AGGCCTTGGC
(
2
)
GCCCTGAAGA (
2
)
4.6
0.0046
P8 GC+1d culture
TATGTAACAA
2.3
0.0023
P8 GC+SHH+1d culture
CCCAGCTCTT
(
2
)
1.2
0.0012
3T3 fibroblasts
CCCAGCTCTT
(
2
)
3.5
0.0035
P1 cortex
AGCCTGGACT
4.5
0.0045
Hypothalamus
AGCCTGGACT
AGGCCTTGGC
(
2
)
3.6
0.0036
E12.5 retina
TATGTAACAA
1.9
0.0019
E14.5 retina
CTGACAACCT (
3
)
1.8
0.0018
E16.5 retina
AGGCCTTGGC
(
2
)
3.6
0.0036
E18.5 retina
AGCCTGGACT
1.8
0.0018
P0.5 retina
AGCCTGGACT
AGGCCTTGGC
(
2
)
5.9
0.0059
P2.5 retina
AGCCTGGACT
CTGACAACCT (
3
)
GCCCTGAAGA (
2
)
7.1
0.0071
P4.5 retina
TATGTAACAA
2
0.002
P6.5 retina
AGCCTGGACT
CTGACAACCT (
3
)
3.4
0.0034
P10.5 crx- retina
AGCCTGGACT
1.9
0.0019
P10.5 crx+ retina
AGCCTGGACT
AGGCCTTGGC
(
2
)
3.8
0.0038
Adult retinal
AGCCTGGACT
AGGCCTTGGC
(
2
)
CCCAGCTCTT
(
2
)
5.7
0.0057
ONL
CCCAGCTCTT
(
2
)
CTGACAACCT (
3
)
3.8
0.0038
