Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290447
Arih2
ariadne homolog 2 (Drosophila)
9
23807
Mm.290447
8030474H12Rik
RIKEN cDNA 8030474H12 gene
9
319233
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 73 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
ACCTGACCAG
(
2
)
6.5
0.0065
P8 Cb GC
CCCTGACCAG (
4
)
1.6
0.0016
P8 Cb GC
GAGGGCGCCC (
4
)
1.6
0.0016
P8 Cb GC
GGCCGGGAGT (
3
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
ACCTGACCAG
(
2
)
9.2
0.0092
Cb medulloblastoma
TCTGAAGACA (
5
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GAAAGTTGAG
(
3
)
2.3
0.0023
P8 GC+1d culture
TCTGAAGACA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
ACCTGACCAG
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
TCTGAAGACA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GAAAGTTGAG
(
3
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
GGCCGGGAGT (
3
)
7
0.007
3T3 fibroblasts
ACCTGACCAG
(
2
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
ACCTGACCAG
(
2
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
GAGGGCGCCC (
4
)
4.5
0.0045
P1 cortex
TCTGAAGACA (
5
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
ATGCTGGAAA
(
4
)
1.8
0.0018
Hypothalamus
TCTGAAGACA (
5
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
TCTGAAGACA (
5
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
ACCTGACCAG
(
2
)
1.8
0.0018
E14.5 retina
TCTGAAGACA (
5
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
ACCTGACCAG
(
2
)
3.6
0.0036
E16.5 retina
TCTGAAGACA (
5
)
3.6
0.0036
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
TCTGAAGACA (
5
)
3.6
0.0036
E18.5 retina
ACCTGACCAG
(
2
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
ACCTGACCAG
(
2
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
TCTGAAGACA (
5
)
7
0.007
P2.5 retina
ACCTGACCAG
(
2
)
3.5
0.0035
P2.5 retina
GAGGGCGCCC (
4
)
3.5
0.0035
P2.5 retina
ATGCTGGAAA
(
4
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
ACCTGACCAG
(
2
)
7.9
0.0079
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TCTGAAGACA (
5
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
ACCTGACCAG
(
2
)
10
0.01
P6.5 retina
TCTGAAGACA (
5
)
6.7
0.0067
P6.5 retina
CCCTGACCAG (
4
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
ACCTGACCAG
(
2
)
7.4
0.0074
P10.5 crx- retina
TCTGAAGACA (
5
)
7.4
0.0074
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
ACCTGACCAG
(
2
)
15.4
0.0154
P10.5 crx+ retina
TCTGAAGACA (
5
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TCTGAAGACA (
5
)
18.5
0.0185
Adult retinal
ACCTGACCAG
(
2
)
7.4
0.0074
Adult retinal
ATGCTGGAAA
(
4
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
TCTGAAGACA (
5
)
7.7
0.0077
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
ACCTGACCAG
(
2
)
1.9
0.0019
ONL
CCCTGACCAG (
4
)
1.9
0.0019
