Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290610	Notch1	Notch gene homolog 1 (Drosophila)	2	2 A3 (2 15.0 cM)	18128
Gene Ontology	calcium ion binding | cell differentiation | cell fate specification | compartment specification | determination of left/right symmetry | development | DNA binding | endoderm development | extracellular space | heart development | integral to membrane | keratinocyte differentiation | membrane | N signaling pathway | positive regulation of apoptosis | positive regulation of transcription from Pol II promoter | protein binding | receptor activity | regulation of development | regulation of transcription, DNA-dependent | somatic stem cell renewal | transcription factor activity
Human Homolog	NOTCH1[Notch homolog 1, translocation-associated (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAACTGTA (4) 4.9 0.0049 P8 Cb GC GGGGCACCTG (8) 3.3 0.0033 P8 Cb GC GCACTGCCCT (11) 1.6 0.0016 Cb medulloblastoma CCAAGGCTCC (2) 4.6 0.0046 P8 GC+1d culture CAAAACTGTA (4) 2.3 0.0023 P8 GC+1d culture CACTGTGTGG (2) 2.3 0.0023 P8 GC+1d culture GAAAGGGTGG (6) 1.1 0.0011 P8 GC+1d culture GCACTGCCCT (11) 1.1 0.0011 P8 GC+1d culture GGGGCACCTG (8) 1.1 0.0011 P8 GC+SHH+1d culture CAAAACTGTA (4) 3.5 0.0035 P8 GC+SHH+1d culture GCACTGCCCT (11) 1.2 0.0012 P8 GC+SHH+1d culture TAGTTTTTTT (4) 1.2 0.0012 3T3 fibroblasts GCACTGCCCT (11) 14 0.014 3T3 fibroblasts GGGGCACCTG (8) 10.5 0.0105 3T3 fibroblasts CACTGTGTGG (2) 3.5 0.0035 E15 cortex GGGGCACCTG (8) 9.9 0.0099 P1 cortex CAAAACTGTA (4) 4.5 0.0045 P1 cortex GGGGCACCTG (8) 4.5 0.0045 Hypothalamus CCAAGGCTCC (2) 9.1 0.0091 E12.5 retina CAAAACTGTA (4) 16.9 0.0169 E14.5 retina CAAAACTGTA (4) 18.2 0.0182 E14.5 retina TAGTTTTTTT (4) 3.6 0.0036 E14.5 retina GAAAGGGTGG (6) 1.8 0.0018 E16.5 retina CAAAACTGTA (4) 19.9 0.0199 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GAAAGGGTGG (6) 1.8 0.0018 E18.5 retina CAAAACTGTA (4) 30.9 0.0309 E18.5 retina GGGGCACCTG (8) 1.8 0.0018 P0.5 retina CAAAACTGTA (4) 23.6 0.0236 P0.5 retina CCGTCCCAGA 5.9 0.0059 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina CACTGTGTGG (2) 2 0.002 P0.5 retina GGGGCACCTG (8) 2 0.002 P2.5 retina CAAAACTGTA (4) 45.8 0.0458 P2.5 retina CCGTCCCAGA 1.8 0.0018 P2.5 retina GGGGCACCTG (8) 1.8 0.0018 P4.5 retina CAAAACTGTA (4) 57.5 0.0575 P4.5 retina CCGTCCCAGA 2 0.002 P6.5 retina CAAAACTGTA (4) 11.7 0.0117 P6.5 retina CACTGTGTGG (2) 1.7 0.0017 P6.5 retina GGGGCACCTG (8) 1.7 0.0017 P10.5 crx- retina CAAAACTGTA (4) 7.4 0.0074 P10.5 crx+ retina CAAAACTGTA (4) 1.9 0.0019 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal CCAAGGCTCC (2) 1.9 0.0019 ONL CAAAACTGTA (4) 3.8 0.0038