Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290690
BC021438
cDNA sequence BC021438
9
215194
Human Homolog
FLJ12949[hypothetical protein FLJ12949]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
ACATAAATAA
(
4
)
2.3
0.0023
Cb medulloblastoma
AGGAGGAAGA (
14
)
2.3
0.0023
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
CACCTCACCA (
3
)
6.8
0.0068
P8 GC+1d culture
ACATAAATAA
(
4
)
2.3
0.0023
P8 GC+1d culture
AGGACAGGGG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
ACATAAATAA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
CACCTCACCA (
3
)
1.2
0.0012
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
AGGAGGAAGA (
14
)
4.9
0.0049
E15 cortex
CACCTCACCA (
3
)
4.9
0.0049
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
P1 cortex
AGGAGGAAGA (
14
)
4.5
0.0045
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
ACATAAATAA
(
4
)
3.6
0.0036
Hypothalamus
TGGGAGAAGA
1.8
0.0018
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
ACATAAATAA
(
4
)
5.6
0.0056
E12.5 retina
CACCTCACCA (
3
)
1.9
0.0019
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
CACCTCACCA (
3
)
3.6
0.0036
E14.5 retina
ACATAAATAA
(
4
)
1.8
0.0018
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
ACATAAATAA
(
4
)
7.2
0.0072
E16.5 retina
CACCTCACCA (
3
)
1.8
0.0018
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
ACATAAATAA
(
4
)
7.3
0.0073
E18.5 retina
CACCTCACCA (
3
)
3.6
0.0036
E18.5 retina
AGGACAGGGG (
4
)
1.8
0.0018
E18.5 retina
AGGAGGAAGA (
14
)
1.8
0.0018
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
CACCTCACCA (
3
)
9.8
0.0098
P0.5 retina
ACATAAATAA
(
4
)
2
0.002
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
ACATAAATAA
(
4
)
8.8
0.0088
P2.5 retina
CACCTCACCA (
3
)
5.3
0.0053
P2.5 retina
AGGACAGGGG (
4
)
1.8
0.0018
P2.5 retina
TGGGAGAAGA
1.8
0.0018
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
ACATAAATAA
(
4
)
11.9
0.0119
P4.5 retina
CACCTCACCA (
3
)
5.9
0.0059
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
AGGAGGAAGA (
14
)
1.7
0.0017
P6.5 retina
CACCTCACCA (
3
)
1.7
0.0017
P6.5 retina
TGGGAGAAGA
1.7
0.0017
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
ACATAAATAA
(
4
)
1.9
0.0019
P10.5 crx- retina
AGGAGGAAGA (
14
)
1.9
0.0019
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
ACATAAATAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
AGGACAGGGG (
4
)
1.9
0.0019
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
ACATAAATAA
(
4
)
1.9
0.0019
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
AGGACAGGGG (
4
)
1.9
0.0019
ONL
AGGAGGAAGA (
14
)
1.9
0.0019
