Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290720	AW742481	expressed sequence AW742481	5		101013
Mm.290720	Bri3bp	Bri3 binding protein	5		76809
Gene Ontology	integral to membrane
Human Homolog	BRI3BP[BRI3 binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACCCTGTC (35) 6.5 0.0065 P8 Cb GC AAAGCTGCTT (3) 3.3 0.0033 P8 Cb GC CGCAAACATT (2) 1.6 0.0016 P8 Cb GC GTGGCTTGCA (6) 1.6 0.0016 Cb medulloblastoma AGACCCTGTC (35) 20.8 0.0208 Cb medulloblastoma GTGGTGCACA (18) 4.6 0.0046 Cb medulloblastoma GGCTGTGGCT (4) 2.3 0.0023 Cb medulloblastoma TAAATAACCC (3) 2.3 0.0023 P8 GC+1d culture AGACCCTGTC (35) 4.6 0.0046 P8 GC+1d culture GGCTACTGGC (4) 4.6 0.0046 P8 GC+1d culture AAAGCTGCTT (3) 1.1 0.0011 P8 GC+1d culture CGCAAACATT (2) 1.1 0.0011 P8 GC+1d culture GGCTGTGGCT (4) 1.1 0.0011 P8 GC+1d culture GTGGTGCACA (18) 1.1 0.0011 P8 GC+1d culture TAAATAACCC (3) 1.1 0.0011 P8 GC+SHH+1d culture GTGGTGCACA (18) 4.7 0.0047 P8 GC+SHH+1d culture AGACCCTGTC (35) 1.2 0.0012 P8 GC+SHH+1d culture CGCAAACATT (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCTGTGGCT (4) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCTTGCA (6) 1.2 0.0012 P8 GC+SHH+1d culture TGCGTGTGTG (16) 1.2 0.0012 3T3 fibroblasts GTGGTGCACA (18) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AAAGCTGCTT (3) 7 0.007 3T3 fibroblasts GTGGCTTGCA (6) 3.5 0.0035 3T3 fibroblasts TGCGTGTGTG (16) 3.5 0.0035 E15 cortex GTGGTGCACA (18) 24.7 0.0247 E15 cortex AGACCCTGTC (35) 14.8 0.0148 E15 cortex AGAGCAGAGG (7) 4.9 0.0049 E15 cortex GGCTACTGGC (4) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GTGGTGCACA (18) 13.6 0.0136 P1 cortex AGACCCTGTC (35) 4.5 0.0045 P1 cortex GTGGCTTGCA (6) 4.5 0.0045 Hypothalamus GTGGTGCACA (18) 3.6 0.0036 Hypothalamus AGACCCTGTC (35) 1.8 0.0018 Hypothalamus AGAGCAGAGG (7) 1.8 0.0018 E12.5 retina AGACCCTGTC (35) 5.6 0.0056 E12.5 retina GTGGTGCACA (18) 3.8 0.0038 E12.5 retina AAAGCTGCTT (3) 1.9 0.0019 E12.5 retina CGCAAACATT (2) 1.9 0.0019 E12.5 retina TAAATAACCC (3) 1.9 0.0019 E14.5 retina GTGGTGCACA (18) 7.3 0.0073 E14.5 retina AGACCCTGTC (35) 5.5 0.0055 E14.5 retina AAAGCTGCTT (3) 3.6 0.0036 E14.5 retina GGCTACTGGC (4) 3.6 0.0036 E14.5 retina GGGCTACTGG (2) 1.8 0.0018 E14.5 retina GTGGCTTGCA (6) 1.8 0.0018 E14.5 retina TGCGTGTGTG (16) 1.8 0.0018 E16.5 retina AGACCCTGTC (35) 3.6 0.0036 E16.5 retina GTGGTGCACA (18) 3.6 0.0036 E16.5 retina AAAGCTGCTT (3) 1.8 0.0018 E16.5 retina GTGGCTTGCA (6) 1.8 0.0018 E18.5 retina AGACCCTGTC (35) 10.9 0.0109 E18.5 retina GTGGTGCACA (18) 3.6 0.0036 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GTGGTGCACA (18) 3.9 0.0039 P0.5 retina AGACCCTGTC (35) 2 0.002 P0.5 retina GGCTACTGGC (4) 2 0.002 P0.5 retina GTGGCTTGCA (6) 2 0.002 P0.5 retina TGCGTGTGTG (16) 2 0.002 P2.5 retina AGACCCTGTC (35) 12.3 0.0123 P2.5 retina GTGGTGCACA (18) 7 0.007 P2.5 retina AAAGCTGCTT (3) 5.3 0.0053 P2.5 retina GGCTACTGGC (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina GTGGCTTGCA (6) 1.8 0.0018 P2.5 retina TGCGTGTGTG (16) 1.8 0.0018 P4.5 retina AGACCCTGTC (35) 7.9 0.0079 P4.5 retina GTGGCTTGCA (6) 4 0.004 P4.5 retina GTGGTGCACA (18) 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AGACCCTGTC (35) 6.7 0.0067 P6.5 retina GTGGTGCACA (18) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GTGGCTTGCA (6) 3.3 0.0033 P6.5 retina AAAGCTGGTT (3) 1.7 0.0017 P6.5 retina GGCTACTGGC (4) 1.7 0.0017 P6.5 retina TGCGTGTGTG (16) 1.7 0.0017 P10.5 crx- retina AAAGCTGCTT (3) 3.7 0.0037 P10.5 crx- retina CGCAAACATT (2) 3.7 0.0037 P10.5 crx- retina AGACCCTGTC (35) 1.9 0.0019 P10.5 crx+ retina AGACCCTGTC (35) 11.5 0.0115 P10.5 crx+ retina AAAGCTGGTT (3) 5.8 0.0058 P10.5 crx+ retina GTGGTGCACA (18) 5.8 0.0058 P10.5 crx+ retina AAAGCTGCTT (3) 1.9 0.0019 P10.5 crx+ retina AGAGCAGAGG (7) 1.9 0.0019 P10.5 crx+ retina GGCTACTGGC (4) 1.9 0.0019 Adult retinal AGACCCTGTC (35) 13 0.013 Adult retinal GTGGTGCACA (18) 9.3 0.0093 Adult retinal GGGCTACTGG (2) 3.7 0.0037 Adult retinal AAAGCTGGTT (3) 1.9 0.0019 Adult retinal CGCAAACATT (2) 1.9 0.0019 Adult retinal GGCTACTGGC (4) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAAATAACCC (3) 1.9 0.0019 ONL AGACCCTGTC (35) 17.2 0.0172 ONL GTGGTGCACA (18) 11.5 0.0115 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAAGCTGCTT (3) 3.8 0.0038 ONL AAAGCTGGTT (3) 3.8 0.0038 ONL GTGGCTTGCA (6) 3.8 0.0038 ONL CGCAAACATT (2) 1.9 0.0019 ONL TGCGTGTGTG (16) 1.9 0.0019