Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290734
Zfyve20
zinc finger, FYVE domain containing 20
6
6 D1
78287
Gene Ontology
zinc ion binding
Human Homolog
ZFYVE20[zinc finger, FYVE domain containing 20]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAAAAAAAA (
80
)
13.1
0.0131
P8 Cb GC
TTCAAAAAAA (
25
)
13.1
0.0131
Cb medulloblastoma
TTAAAAAAAA (
80
)
53.2
0.0532
Cb medulloblastoma
TTCAAAAAAA (
25
)
37
0.037
Cb medulloblastoma
GCTGGAAAAA
(
11
)
2.3
0.0023
P8 GC+1d culture
TTAAAAAAAA (
80
)
28.5
0.0285
P8 GC+1d culture
TTCAAAAAAA (
25
)
12.6
0.0126
P8 GC+1d culture
GCCCTGGGGC (
7
)
10.3
0.0103
P8 GC+1d culture
GCTGGAAAAA
(
11
)
1.1
0.0011
P8 GC+SHH+1d culture
TTAAAAAAAA (
80
)
34
0.034
P8 GC+SHH+1d culture
TTCAAAAAAA (
25
)
29.3
0.0293
P8 GC+SHH+1d culture
GCCCTGGGGC (
7
)
1.2
0.0012
3T3 fibroblasts
GCCCTGGGGC (
7
)
31.5
0.0315
E15 cortex
TTCAAAAAAA (
25
)
29.7
0.0297
E15 cortex
ACTTTTATCC
(
4
)
4.9
0.0049
E15 cortex
CAGGTCAGAG (
6
)
4.9
0.0049
E15 cortex
GCCCTGGGGC (
7
)
4.9
0.0049
E15 cortex
TTAAAAAAAA (
80
)
4.9
0.0049
P1 cortex
TTAAAAAAAA (
80
)
13.6
0.0136
P1 cortex
GCCCTGGGGC (
7
)
4.5
0.0045
P1 cortex
TTCAAAAAAA (
25
)
4.5
0.0045
Hypothalamus
TTAAAAAAAA (
80
)
19.9
0.0199
Hypothalamus
GCCCTGGGGC (
7
)
7.2
0.0072
Hypothalamus
TTCAAAAAAA (
25
)
7.2
0.0072
Hypothalamus
GCTGGAAAAA
(
11
)
1.8
0.0018
E12.5 retina
TTAAAAAAAA (
80
)
11.3
0.0113
E12.5 retina
TTCAAAAAAA (
25
)
9.4
0.0094
E12.5 retina
GCCCTGGGGC (
7
)
3.8
0.0038
E14.5 retina
TTCAAAAAAA (
25
)
20
0.02
E14.5 retina
TTAAAAAAAA (
80
)
16.4
0.0164
E16.5 retina
TTAAAAAAAA (
80
)
16.3
0.0163
E16.5 retina
TTCAAAAAAA (
25
)
9.1
0.0091
E16.5 retina
GCCCTGGGGC (
7
)
1.8
0.0018
E18.5 retina
TTAAAAAAAA (
80
)
50.9
0.0509
E18.5 retina
TTCAAAAAAA (
25
)
36.4
0.0364
P0.5 retina
TTAAAAAAAA (
80
)
17.7
0.0177
P0.5 retina
TTCAAAAAAA (
25
)
9.8
0.0098
P0.5 retina
GCCCTGGGGC (
7
)
7.9
0.0079
P0.5 retina
GCTGGAAAAA
(
11
)
2
0.002
P2.5 retina
TTAAAAAAAA (
80
)
40.5
0.0405
P2.5 retina
TTCAAAAAAA (
25
)
7
0.007
P2.5 retina
ACTTTTATCC
(
4
)
3.5
0.0035
P2.5 retina
CACTACACTG
(
4
)
1.8
0.0018
P2.5 retina
GCCCTGGGGC (
7
)
1.8
0.0018
P4.5 retina
TTAAAAAAAA (
80
)
47.6
0.0476
P4.5 retina
TTCAAAAAAA (
25
)
31.7
0.0317
P4.5 retina
GCCCTGGGGC (
7
)
2
0.002
P4.5 retina
GCTGGAAAAA
(
11
)
2
0.002
P6.5 retina
TTAAAAAAAA (
80
)
16.7
0.0167
P6.5 retina
TTCAAAAAAA (
25
)
8.3
0.0083
P6.5 retina
GCTGGAAAAA
(
11
)
3.3
0.0033
P6.5 retina
CACTACACTG
(
4
)
1.7
0.0017
P6.5 retina
GCCCTGGGGC (
7
)
1.7
0.0017
P10.5 crx- retina
TTAAAAAAAA (
80
)
13
0.013
P10.5 crx- retina
GCCCTGGGGC (
7
)
5.6
0.0056
P10.5 crx- retina
TTCAAAAAAA (
25
)
5.6
0.0056
P10.5 crx- retina
CAGGTCAGAG (
6
)
3.7
0.0037
P10.5 crx- retina
GCTGGAAAAA
(
11
)
1.9
0.0019
P10.5 crx+ retina
GCTGGAAAAA
(
11
)
9.6
0.0096
P10.5 crx+ retina
TTCAAAAAAA (
25
)
9.6
0.0096
P10.5 crx+ retina
TTAAAAAAAA (
80
)
5.8
0.0058
P10.5 crx+ retina
GCCCTGGGGC (
7
)
3.8
0.0038
Adult retinal
CTCCAGATTG
(
2
)
9.3
0.0093
Adult retinal
GCCCTGGGGC (
7
)
9.3
0.0093
Adult retinal
TTAAAAAAAA (
80
)
7.4
0.0074
Adult retinal
TTCAAAAAAA (
25
)
5.6
0.0056
Adult retinal
CACTACACTG
(
4
)
1.9
0.0019
Adult retinal
GCTGGAAAAA
(
11
)
1.9
0.0019
ONL
TTAAAAAAAA (
80
)
7.7
0.0077
ONL
TTCAAAAAAA (
25
)
3.8
0.0038
ONL
ACTTTTATCC
(
4
)
1.9
0.0019
ONL
GCCCTGGGGC (
7
)
1.9
0.0019
