Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290899	Rpl3	ribosomal protein L3	15		27367
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | structural constituent of ribosome
Human Homolog	RPL3[ribosomal protein L3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 190 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AACCCCCCCC ACCCACATCG ATGAAGTTAT CGTGCAAGCA GAGGAGAAGA GAGGAGAAGG (3) GCACCCTGCC (2) GCCAAATTTG (4) GGCAAAATTG (2) GGTCCTTGGG TTCCTGTGAA (2) 291.8 0.2918 Cb medulloblastoma AAAAAAAAAA (2) ATGAAGTTAT CGTGCAAGCA GAGGAGAAGA GAGGAGAGCA (2) GCACCCTGCC (2) GGCAAAATTG (2) GGTCCTTGGG GGTGACAAAA GTCGCTTCCA 871.7 0.8717 P8 GC+1d culture AAAAAAAAAA (2) AGAAAATGCT (2) ATGAAGTTAT CGTGCAAGCA GAGGAGAAAG (2) GAGGAGAAGA GAGGAGAAGG (3) GCACCCTGCC (2) GCCAAAATTT GCCAAATTTG (4) GGCAAAATTG (2) TTGGCTAAAA 285.2 0.2852 P8 GC+SHH+1d culture AAAAAAAAAA (2) ATGAAGTTAT CGTGCAAGCA GAGAAGTACT (2) GAGGAGAAGA GAGGAGAAGG (3) GCACCCTGCC (2) GCCAAAATTT GCCAAATTTG (4) GGTCCTTGGG GGTTTGGAAA TTGGCTAAAA 379.5 0.3795 3T3 fibroblasts AAAAAAAAAA (2) CGTGCAAGCA GAGGAGAAGA GCACCCTGCC (2) 49 0.049 E15 cortex AAAAAAAAAA (2) AACCCCCCCC CGTGCAAGCA CTCAAAGGCT GAGGAGAAGA GCCAAATTTG (4) GTCGCTTCCA TTGGCTAAAA 271.9 0.2719 P1 cortex AAAAAAAAAA (2) CTCAAAGGCT GAGGAGAAGA GCACCCTGCC (2) 272.6 0.2726 Hypothalamus AAAAAAAAAA (2) ACCCACATCG AGAAAATGCT (2) ATGAAGTCAT CTCAAAGGCT GAGAAGTACT (2) GAGAGAAGAA (4) GAGGAGAAGA GAGGGAGAAG GCACCCTGCC (2) GCCAAATTTG (4) GTCGCTTCCA 235.3 0.2353 E12.5 retina AAAAAAAAAA (2) ACCCACATCG ATGAAGTCAT CGTGCAAGCA GAGAGAAGAA (4) GAGGAGAAGA GAGGGAGAAG GCACCCTGCC (2) GCCAAATTTG (4) GGACCACTCA GGTGACAAAA TTGGCTAAAA 411.3 0.4113 E14.5 retina AAAAAAAAAA (2) ACCCACATCG ATGAAGTCAT ATGAAGTTAT CTCAAAGGCT GAGAAGTACT (2) GAGAGAAGAA (4) GAGGAAAAGA (2) GAGGAGAAGA GAGGAGAGCA (2) GCACCCTGCC (2) GCCAAATTTG (4) GGACCACTCA 220.1 0.2201 E16.5 retina AAAAAAAAAA (2) AGAAAATGCT (2) ATGAAGTTAT CGTGCAAGCA GAGAGAAGAA (4) GAGGAGAAGA GAGGAGAAGG (3) GCACCCTGCC (2) GCCAAATTTG (4) 137.6 0.1376 E18.5 retina AAAAAAAAAA (2) ATGAAGTTAT GAGAGAAGAA (4) GAGGAGAAAG (2) GAGGAGAAGA GCACCCTGCC (2) GCCAAATTTG (4) GGGGAGAAGA GGTTTGGAAA 471.1 0.4711 P0.5 retina AAAAAAAAAA (2) ACCCACATCG AGAAAATGCT (2) GAGGAGAAGA GAGGAGAAGG (3) GCACCCTGCC (2) GCCAAAATTT GCCAAATTTG (4) GGGGAGAAGA 223.9 0.2239 P2.5 retina AAAAAAAAAA (2) ATGAAGTCAT ATGAAGTTAT CGTGCAAGCA GAGAGAAGAA (4) GAGGAGAAGA GAGGAGAAGG (3) GCACCCTGCC (2) GGGGAGAAGA TTCCTGTGAA (2) 424.3 0.4243 P4.5 retina AAAAAAAAAA (2) ATGAAGTTAT GAGGAAAAGA (2) GAGGAGAAAG (2) GAGGAGAAGA GCACCCTGCC (2) GCCAAAATTT GCCAAATTTG (4) GCCCCCCCTC TTGGCTAAAA 394.4 0.3944 P6.5 retina AAAAAAAAAA (2) ACCCACATCG GAGGAGAAGA GAGGAGAAGG (3) GCACCCTGCC (2) GCCAAAATTT GCCAAATTTG (4) GGCAAATATG TTGGCTAAAA 335.2 0.3352 P10.5 crx- retina AAAAAAAAAA (2) ACCCACATCG AGAAAATGCT (2) ATGAAGTCAT ATGAAGTTAT GAGGAGAAAG (2) GAGGAGAAGA GCACCCTGCC (2) GCCAAATTTG (4) 102.3 0.1023 P10.5 crx+ retina AAAAAAAAAA (2) GAGGAGAAGA GCACCCTGCC (2) GCCAAATTTG (4) GGTTTGGAAA 157.5 0.1575 Adult retinal AAAAAAAAAA (2) ATGAAGTCAT ATGAAGTTAT GAGGAGAAGA GCACCCTGCC (2) GCCAAATTTG (4) GCCCCCCCTC GGCAAATATG GGTGACAAAA GTCGCTTCCA TTCCTGTGAA (2) 128 0.128 ONL AAAAAAAAAA (2) AGAAAATGCT (2) ATGAAGTTAT GAGGAAAAGA (2) GAGGAGAAGA GCCAAATTTG (4) GGACCACTCA GGTCCTTGGG GGTTTGGAAA TTGGCTAAAA 158.8 0.1588