Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29090
Trappc5
trafficking protein particle complex 5
8
8 0.39 cM
66682
Mm.29090
BB094273
expressed sequence BB094273
8
102359
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
AGGTTGAGTG
(
2
)
2.3
0.0023
P8 GC+1d culture
ATCAAATTTG
(
2
)
3.4
0.0034
P8 GC+1d culture
AGGTTGAGTG
(
2
)
2.3
0.0023
P8 GC+1d culture
TAGAGCCAGA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
ATCAAATTTG
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
AGGTTGAGTG
(
2
)
2.3
0.0023
3T3 fibroblasts
AGGTTGAGTG
(
2
)
3.5
0.0035
E15 cortex
AGGTTGAGTG
(
2
)
4.9
0.0049
E15 cortex
ATCAAATTTG
(
2
)
4.9
0.0049
P1 cortex
AGGTTGAGTG
(
2
)
4.5
0.0045
P1 cortex
TAGAGCCAGA
(
2
)
4.5
0.0045
Hypothalamus
AAGGGTGCAG
(
2
)
3.6
0.0036
Hypothalamus
TAGAGCCAGA
(
2
)
3.6
0.0036
Hypothalamus
AGGTTGAGTG
(
2
)
1.8
0.0018
Hypothalamus
CAGAGTCAGA (
5
)
1.8
0.0018
E12.5 retina
AGGTTGAGTG
(
2
)
5.6
0.0056
E12.5 retina
ATCAAATTTG
(
2
)
1.9
0.0019
E16.5 retina
AGGTTGAGTG
(
2
)
1.8
0.0018
E16.5 retina
ATCAAATTTG
(
2
)
1.8
0.0018
E16.5 retina
CAGAGTCAGA (
5
)
1.8
0.0018
E16.5 retina
TAGAGCCAGA
(
2
)
1.8
0.0018
E18.5 retina
ATCAAATTTG
(
2
)
1.8
0.0018
E18.5 retina
TAGAGCCAGA
(
2
)
1.8
0.0018
P0.5 retina
AGGTTGAGTG
(
2
)
3.9
0.0039
P0.5 retina
TAGAGCCAGA
(
2
)
2
0.002
P2.5 retina
AGGTTGAGTG
(
2
)
3.5
0.0035
P2.5 retina
CAGAGTCAGA (
5
)
1.8
0.0018
P2.5 retina
TAGAGCCAGA
(
2
)
1.8
0.0018
P4.5 retina
AGGTTGAGTG
(
2
)
4
0.004
P4.5 retina
TAGAGCCAGA
(
2
)
2
0.002
P6.5 retina
AAGGGTGCAG
(
2
)
1.7
0.0017
P6.5 retina
AGGTTGAGTG
(
2
)
1.7
0.0017
P6.5 retina
ATCAAATTTG
(
2
)
1.7
0.0017
P10.5 crx- retina
ATCAAATTTG
(
2
)
3.7
0.0037
P10.5 crx+ retina
ATCAAATTTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAGAGCCAGA
(
2
)
1.9
0.0019
Adult retinal
AGGTTGAGTG
(
2
)
3.7
0.0037
Adult retinal
AAGGGTGCAG
(
2
)
1.9
0.0019
