Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290906
Sp100
nuclear antigen Sp100
1
1 50.0 cM
20684
Gene Ontology
chromosome
|
DNA binding
|
nucleus
Human Homolog
SP100[nuclear antigen Sp100]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAAAAAAAA (
47
)
17.9
0.0179
P8 Cb GC
TATTTCAAAA (
14
)
3.3
0.0033
Cb medulloblastoma
AGAAAAAAAA (
47
)
53.2
0.0532
Cb medulloblastoma
CAGGCAAACA (
10
)
6.9
0.0069
Cb medulloblastoma
TATTTCAAAA (
14
)
4.6
0.0046
Cb medulloblastoma
TACTTCAAAA
(
3
)
2.3
0.0023
P8 GC+1d culture
AGAAAAAAAA (
47
)
8
0.008
P8 GC+1d culture
TATTTCAAAA (
14
)
2.3
0.0023
P8 GC+SHH+1d culture
AGAAAAAAAA (
47
)
14.1
0.0141
P8 GC+SHH+1d culture
TATTTCAAAA (
14
)
2.3
0.0023
3T3 fibroblasts
AGAAAAAAAA (
47
)
3.5
0.0035
3T3 fibroblasts
CAAACCATAC
3.5
0.0035
3T3 fibroblasts
CAGGCAAACA (
10
)
3.5
0.0035
3T3 fibroblasts
TACTTCAAAA
(
3
)
3.5
0.0035
E15 cortex
AGAAAAAAAA (
47
)
14.8
0.0148
E15 cortex
CAGGCAAACC
(
7
)
4.9
0.0049
P1 cortex
AGAAAAAAAA (
47
)
9.1
0.0091
P1 cortex
TACTTCAAAA
(
3
)
4.5
0.0045
Hypothalamus
AGAAAAAAAA (
47
)
32.6
0.0326
Hypothalamus
TATTTCAAAA (
14
)
3.6
0.0036
Hypothalamus
CAGGCAAACC
(
7
)
1.8
0.0018
Hypothalamus
TACTTCAAAA
(
3
)
1.8
0.0018
E12.5 retina
AGAAAAAAAA (
47
)
20.7
0.0207
E12.5 retina
CAGGCAAACA (
10
)
3.8
0.0038
E12.5 retina
CAAACCATAC
1.9
0.0019
E12.5 retina
TACTTCAAAA
(
3
)
1.9
0.0019
E14.5 retina
AGAAAAAAAA (
47
)
20
0.02
E14.5 retina
TATTTCAAAA (
14
)
5.5
0.0055
E14.5 retina
CAGGCAAACA (
10
)
1.8
0.0018
E14.5 retina
TACTTCAAAA
(
3
)
1.8
0.0018
E16.5 retina
AGAAAAAAAA (
47
)
10.9
0.0109
E16.5 retina
TATTTCAAAA (
14
)
1.8
0.0018
E18.5 retina
AGAAAAAAAA (
47
)
29.1
0.0291
E18.5 retina
TACTTCAAAA
(
3
)
1.8
0.0018
E18.5 retina
TATTTCAAAA (
14
)
1.8
0.0018
P0.5 retina
AGAAAAAAAA (
47
)
13.7
0.0137
P0.5 retina
CAGGCAAACA (
10
)
3.9
0.0039
P2.5 retina
AGAAAAAAAA (
47
)
17.6
0.0176
P2.5 retina
CAGGCAAACA (
10
)
3.5
0.0035
P2.5 retina
TATTTCAAAA (
14
)
3.5
0.0035
P2.5 retina
TACTTCAAAA
(
3
)
1.8
0.0018
P4.5 retina
AGAAAAAAAA (
47
)
31.7
0.0317
P4.5 retina
CAGGCAAACA (
10
)
4
0.004
P4.5 retina
TATTTCAAAA (
14
)
2
0.002
P6.5 retina
AGAAAAAAAA (
47
)
13.3
0.0133
P6.5 retina
CAGGCAAACA (
10
)
6.7
0.0067
P6.5 retina
TATTTCAAAA (
14
)
1.7
0.0017
P10.5 crx- retina
AGAAAAAAAA (
47
)
7.4
0.0074
P10.5 crx+ retina
AGAAAAAAAA (
47
)
5.8
0.0058
P10.5 crx+ retina
CAGGCAAACA (
10
)
3.8
0.0038
P10.5 crx+ retina
TATTTCAAAA (
14
)
1.9
0.0019
Adult retinal
AGAAAAAAAA (
47
)
5.6
0.0056
Adult retinal
CAGGCAAACC
(
7
)
3.7
0.0037
Adult retinal
CAGGCAAACA (
10
)
1.9
0.0019
Adult retinal
TATTTCAAAA (
14
)
1.9
0.0019
ONL
AGAAAAAAAA (
47
)
19.2
0.0192
ONL
CAGGCAAACA (
10
)
3.8
0.0038
ONL
CAAACCATAC
1.9
0.0019
ONL
CAGGCAAACC
(
7
)
1.9
0.0019
ONL
TACTTCAAAA
(
3
)
1.9
0.0019
ONL
TATTTCAAAA (
14
)
1.9
0.0019
