Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290925
5430400N05Rik
RIKEN cDNA 5430400N05 gene
7
209225
Human Homolog
DKFZp547K1113[hypothetical protein DKFZp547K1113]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 29 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGCTTTCG
TATACAAACC
(
2
)
4.9
0.0049
Cb medulloblastoma
GACTCAGGGA
(
2
)
2.3
0.0023
P8 GC+1d culture
GACTCAGGGA
(
2
)
TATACAAACC
(
2
)
3.4
0.0034
P8 GC+SHH+1d culture
GACTCAGGGA
(
2
)
2.3
0.0023
3T3 fibroblasts
GACTCAGGGA
(
2
)
10.5
0.0105
E15 cortex
GCTGCTTTCG
9.9
0.0099
E12.5 retina
GACTCAGGGA
(
2
)
7.5
0.0075
E14.5 retina
GACTCAGGGA
(
2
)
GCTGCTTTCG
TATACAAACC
(
2
)
9
0.009
E16.5 retina
GACTCAGGGA
(
2
)
GCTGCTTTCG
GGGGAGCCAG
TATACAAACC
(
2
)
7.2
0.0072
E18.5 retina
GACTCAGGGA
(
2
)
1.8
0.0018
P0.5 retina
GACTCAGGGA
(
2
)
2
0.002
P2.5 retina
GACTCAGGGA
(
2
)
TATACAAACC
(
2
)
5.3
0.0053
P4.5 retina
GACTCAGGGA
(
2
)
4
0.004
P6.5 retina
GACTCAGGGA
(
2
)
6.7
0.0067
P10.5 crx- retina
GACTCAGGGA
(
2
)
3.7
0.0037
P10.5 crx+ retina
GACTCAGGGA
(
2
)
GCTGCTTTCG
GGGGAGCCAG
7.6
0.0076
Adult retinal
TATACAAACC
(
2
)
1.9
0.0019
ONL
GACTCAGGGA
(
2
)
GCTGCTTTCG
9.6
0.0096
