Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290960	Clptm1	cleft lip and palate associated transmembrane protein 1	7		56457
Gene Ontology	integral to membrane
Human Homolog	CLPTM1[cleft lip and palate associated transmembrane protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGAAGCCAA 4.9 0.0049 P8 Cb GC GTCCTGTGAC (2) 3.3 0.0033 Cb medulloblastoma GTGAAGCCAA 9.2 0.0092 Cb medulloblastoma GTCCTGTGAC (2) 4.6 0.0046 Cb medulloblastoma CCAATGTCTG (4) 2.3 0.0023 P8 GC+1d culture GTGAAGCCAA 8 0.008 P8 GC+1d culture CCAATGTCTG (4) 4.6 0.0046 P8 GC+1d culture ATCTGTCCAG 2.3 0.0023 P8 GC+1d culture GTCCTGTGAC (2) 2.3 0.0023 P8 GC+SHH+1d culture GTGAAGCCAA 11.7 0.0117 P8 GC+SHH+1d culture GTCCTGTGAC (2) 3.5 0.0035 P8 GC+SHH+1d culture CCAATGTCTG (4) 1.2 0.0012 3T3 fibroblasts GTCCTGTGAC (2) 10.5 0.0105 3T3 fibroblasts GTGAAGCCAA 10.5 0.0105 3T3 fibroblasts CCAATGTCTG (4) 3.5 0.0035 P1 cortex GTGAAGCCAA 9.1 0.0091 P1 cortex GATGTGGTGG (6) 4.5 0.0045 P1 cortex GTCCTGTGAC (2) 4.5 0.0045 Hypothalamus GTGAAGCCAA 3.6 0.0036 Hypothalamus CCAATGTCTG (4) 1.8 0.0018 Hypothalamus GTCCTGTGAC (2) 1.8 0.0018 E12.5 retina CCAATGTCTG (4) 3.8 0.0038 E12.5 retina GTCCTGTGAC (2) 3.8 0.0038 E12.5 retina GTGAAGCCAA 3.8 0.0038 E14.5 retina ATCTGTCCAG 1.8 0.0018 E14.5 retina GATGTGGTGG (6) 1.8 0.0018 E14.5 retina GGGGGGTTTT (8) 1.8 0.0018 E16.5 retina ATTCCCGATG 1.8 0.0018 E18.5 retina GTGAAGCCAA 5.5 0.0055 P0.5 retina GGGGGGTTTT (8) 2 0.002 P0.5 retina GTGAAGCCAA 2 0.002 P2.5 retina GTGAAGCCAA 8.8 0.0088 P2.5 retina GTCCTGTGAC (2) 3.5 0.0035 P2.5 retina GGGGGGTTTT (8) 1.8 0.0018 P4.5 retina GATGTGGTGG (6) 2 0.002 P4.5 retina GTGAAGCCAA 2 0.002 P6.5 retina GTGAAGCCAA 5 0.005 P6.5 retina GGGGGGTTTT (8) 1.7 0.0017 P10.5 crx- retina GTGAAGCCAA 9.3 0.0093 P10.5 crx- retina GTCCTGTGAC (2) 7.4 0.0074 P10.5 crx+ retina GTGAAGCCAA 11.5 0.0115 P10.5 crx+ retina GTCCTGTGAC (2) 3.8 0.0038 P10.5 crx+ retina ATTCCCGATG 1.9 0.0019 Adult retinal GTGAAGCCAA 14.8 0.0148 Adult retinal ATCTGTCCAG 1.9 0.0019 Adult retinal GTCCTGTGAC (2) 1.9 0.0019 ONL GTGAAGCCAA 13.4 0.0134 ONL ATTCCCGATG 1.9 0.0019