Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291059
Orc4l
origin recognition complex, subunit 4-like (S. cerevisiae)
2
26428
Mm.291059
C030012N03Rik
RIKEN cDNA C030012N03 gene
2
319333
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACACAGTTT
(
4
)
3.3
0.0033
P8 Cb GC
GATCTTGTTT
(
4
)
3.3
0.0033
P8 Cb GC
CAGAGTGTCT
(
5
)
1.6
0.0016
P8 Cb GC
GGGATGGAAT
(
6
)
1.6
0.0016
P8 Cb GC
TTAAATAAAA
(
8
)
1.6
0.0016
Cb medulloblastoma
CAGAGTGTCT
(
5
)
4.6
0.0046
P8 GC+1d culture
CTGGGAGTTG (
7
)
2.3
0.0023
P8 GC+1d culture
GATCTTGTTT
(
4
)
2.3
0.0023
P8 GC+1d culture
GGGATGGAAT
(
6
)
2.3
0.0023
P8 GC+1d culture
TTAAATAAAA
(
8
)
2.3
0.0023
P8 GC+1d culture
CGTGGTCATT
(
2
)
1.1
0.0011
P8 GC+1d culture
GAAATAGAAG
(
3
)
1.1
0.0011
P8 GC+1d culture
GACACAGTTT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GATCTTGTTT
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
CGTGGTCATT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGGGAGTTG (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GACACAGTTT
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TTAAATAAAA
(
8
)
1.2
0.0012
3T3 fibroblasts
GGGATGGAAT
(
6
)
3.5
0.0035
P1 cortex
CAGAGTGTCT
(
5
)
18.2
0.0182
P1 cortex
TTAAATAAAA
(
8
)
9.1
0.0091
P1 cortex
CTATGTTGGT
(
2
)
4.5
0.0045
P1 cortex
CTGGGAGTTG (
7
)
4.5
0.0045
Hypothalamus
CTGGGAGTTG (
7
)
3.6
0.0036
Hypothalamus
GACACAGTTT
(
4
)
3.6
0.0036
Hypothalamus
CAGAGTGTCT
(
5
)
1.8
0.0018
Hypothalamus
CTATGTTGGT
(
2
)
1.8
0.0018
Hypothalamus
GAAATAGAAG
(
3
)
1.8
0.0018
Hypothalamus
GTCCATAAAA (
2
)
1.8
0.0018
E12.5 retina
GACACAGTTT
(
4
)
3.8
0.0038
E12.5 retina
CTGGGAGTTG (
7
)
1.9
0.0019
E12.5 retina
GGGATGGAAT
(
6
)
1.9
0.0019
E12.5 retina
GTCCATAAAA (
2
)
1.9
0.0019
E14.5 retina
CTATGTTGGT
(
2
)
1.8
0.0018
E14.5 retina
GATCTTGTTT
(
4
)
1.8
0.0018
E16.5 retina
GACACAGTTT
(
4
)
1.8
0.0018
E16.5 retina
GGGATGGAAT
(
6
)
1.8
0.0018
E16.5 retina
GTCCATAAAA (
2
)
1.8
0.0018
E18.5 retina
GACACAGTTT
(
4
)
3.6
0.0036
E18.5 retina
GATCTTGTTT
(
4
)
3.6
0.0036
E18.5 retina
TTAAATAAAA
(
8
)
3.6
0.0036
E18.5 retina
GTCCATAAAA (
2
)
1.8
0.0018
P0.5 retina
CTGGGAGTTG (
7
)
7.9
0.0079
P0.5 retina
GATCTTGTTT
(
4
)
3.9
0.0039
P0.5 retina
GGGATGGAAT
(
6
)
3.9
0.0039
P0.5 retina
GACACAGTTT
(
4
)
2
0.002
P0.5 retina
TTAAATAAAA
(
8
)
2
0.002
P2.5 retina
GATCTTGTTT
(
4
)
7
0.007
P2.5 retina
GACACAGTTT
(
4
)
3.5
0.0035
P2.5 retina
TTAAATAAAA
(
8
)
3.5
0.0035
P4.5 retina
GACACAGTTT
(
4
)
5.9
0.0059
P4.5 retina
CAGAGTGTCT
(
5
)
4
0.004
P4.5 retina
CTGGGAGTTG (
7
)
4
0.004
P4.5 retina
CGTGGTCATT
(
2
)
2
0.002
P4.5 retina
GGGATGGAAT
(
6
)
2
0.002
P6.5 retina
GACACAGTTT
(
4
)
6.7
0.0067
P6.5 retina
CAGAGTGTCT
(
5
)
1.7
0.0017
P6.5 retina
CTGGGAGTTG (
7
)
1.7
0.0017
P6.5 retina
GGGATGGAAT
(
6
)
1.7
0.0017
P6.5 retina
TTAAATAAAA
(
8
)
1.7
0.0017
P10.5 crx- retina
GACACAGTTT
(
4
)
5.6
0.0056
P10.5 crx- retina
GGGATGGAAT
(
6
)
1.9
0.0019
P10.5 crx- retina
TTAAATAAAA
(
8
)
1.9
0.0019
P10.5 crx+ retina
GGGATGGAAT
(
6
)
7.7
0.0077
P10.5 crx+ retina
GACACAGTTT
(
4
)
3.8
0.0038
P10.5 crx+ retina
CAGAGTGTCT
(
5
)
1.9
0.0019
P10.5 crx+ retina
CTGGGAGTTG (
7
)
1.9
0.0019
P10.5 crx+ retina
GATCTTGTTT
(
4
)
1.9
0.0019
Adult retinal
CTGGGAGTTG (
7
)
13
0.013
Adult retinal
GACACAGTTT
(
4
)
1.9
0.0019
Adult retinal
GGGATGGAAT
(
6
)
1.9
0.0019
ONL
CTGGGAGTTG (
7
)
5.7
0.0057
ONL
TTAAATAAAA
(
8
)
3.8
0.0038
ONL
GAAATAGAAG
(
3
)
1.9
0.0019
ONL
GGGATGGAAT
(
6
)
1.9
0.0019
