Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291214
2310005N01Rik
RIKEN cDNA 2310005N01 gene
4
70088
Human Homolog
FLJ11730[hypothetical protein FLJ11730]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
TGGTGTCGAT
(
3
)
4.9
0.0049
P8 Cb GC
AAACAGACGA
3.3
0.0033
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
AAACAGACGA
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
TGGTGTCGAT
(
3
)
5.7
0.0057
P8 GC+1d culture
TTTGATTATG
2.3
0.0023
P8 GC+1d culture
CACACGCACA (
15
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
TGGTGTCGAT
(
3
)
7
0.007
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
TGGTGTCGAT
(
3
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
TGGTGTCGAT
(
3
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
TGGTGTCGAT
(
3
)
9.1
0.0091
P1 cortex
CGAGTTCATA (
2
)
4.5
0.0045
P1 cortex
TTGAAACCCT (
2
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
TGGTGTCGAT
(
3
)
5.4
0.0054
Hypothalamus
CACACGCACA (
15
)
1.8
0.0018
Hypothalamus
CGAGTTCATA (
2
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
CGAGTTCATA (
2
)
3.8
0.0038
E12.5 retina
TGGTGTCGAT
(
3
)
3.8
0.0038
E12.5 retina
AAACAGACGA
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
TGGTGTCGAT
(
3
)
10.9
0.0109
E14.5 retina
AAACAGACGA
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
TGGTGTCGAT
(
3
)
14.5
0.0145
E16.5 retina
AAACAGACGA
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
TGGTGTCGAT
(
3
)
20
0.02
E18.5 retina
AAACAGACGA
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
TGGTGTCGAT
(
3
)
5.9
0.0059
P0.5 retina
CACACGCACA (
15
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
TGGTGTCGAT
(
3
)
12.3
0.0123
P2.5 retina
TTGAAACCCT (
2
)
3.5
0.0035
P2.5 retina
CGAGTTCATA (
2
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TGGTGTCGAT
(
3
)
9.9
0.0099
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
TGGTGTCGAT
(
3
)
10
0.01
P6.5 retina
AAACAGACGA
3.3
0.0033
P6.5 retina
CGAGTTCATA (
2
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
TGGTGTCGAT
(
3
)
3.7
0.0037
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
TGGTGTCGAT
(
3
)
3.8
0.0038
P10.5 crx+ retina
AAACAGACGA
1.9
0.0019
P10.5 crx+ retina
CACACGCACA (
15
)
1.9
0.0019
P10.5 crx+ retina
TTGAAACCCT (
2
)
1.9
0.0019
P10.5 crx+ retina
TTTGATTATG
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TTGAAACCCT (
2
)
3.7
0.0037
Adult retinal
CACACGCACA (
15
)
1.9
0.0019
Adult retinal
TGGTGTCGAT
(
3
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
CACACGCACA (
15
)
5.7
0.0057
ONL
AAACAGACGA
1.9
0.0019
ONL
CGAGTTCATA (
2
)
1.9
0.0019
ONL
TGGTGTCGAT
(
3
)
1.9
0.0019
