Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29122
0610012D09Rik
RIKEN cDNA 0610012D09 gene
7
7 F1
59052
Mm.29122
D3Mgi28
DNA Segment, Chr 3, Mouse Genome Informatics 28
3
99504
Mm.29122
2210406H18Rik
RIKEN cDNA 2210406H18 gene
7
70133
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTAATAAACG
(
4
)
24.5
0.0245
P8 Cb GC
TTTAGAAACT
(
3
)
3.3
0.0033
Cb medulloblastoma
CTAATAAACG
(
4
)
11.6
0.0116
P8 GC+1d culture
CTAATAAACG
(
4
)
11.4
0.0114
P8 GC+SHH+1d culture
CTAATAAACG
(
4
)
23.4
0.0234
P8 GC+SHH+1d culture
GAACCGATCA
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
ATACTGAGAA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTAGAAACT
(
3
)
1.2
0.0012
P1 cortex
CTAATAAACG
(
4
)
13.6
0.0136
Hypothalamus
CTAATAAACG
(
4
)
14.5
0.0145
Hypothalamus
ACTATTGCTT
(
3
)
1.8
0.0018
Hypothalamus
GAACCGATCA
(
4
)
1.8
0.0018
E12.5 retina
CTAATAAACG
(
4
)
24.4
0.0244
E12.5 retina
GAACCGATCA
(
4
)
5.6
0.0056
E12.5 retina
ATACTGAGAA
(
3
)
1.9
0.0019
E14.5 retina
CTAATAAACG
(
4
)
16.4
0.0164
E14.5 retina
TTTAGAAACT
(
3
)
5.5
0.0055
E14.5 retina
GAACCGATCA
(
4
)
1.8
0.0018
E14.5 retina
TAGGAATTTA
(
3
)
1.8
0.0018
E14.5 retina
TTTGTGTTCT
(
3
)
1.8
0.0018
E16.5 retina
CTAATAAACG
(
4
)
38
0.038
E16.5 retina
ACTATTGCTT
(
3
)
3.6
0.0036
E16.5 retina
GAACCGATCA
(
4
)
3.6
0.0036
E16.5 retina
TAGGAATTTA
(
3
)
1.8
0.0018
E16.5 retina
TTTAGAAACT
(
3
)
1.8
0.0018
E18.5 retina
CTAATAAACG
(
4
)
40
0.04
E18.5 retina
GAACCGATCA
(
4
)
1.8
0.0018
E18.5 retina
TAGGAATTTA
(
3
)
1.8
0.0018
P0.5 retina
CTAATAAACG
(
4
)
3.9
0.0039
P0.5 retina
TTTGTGTTCT
(
3
)
2
0.002
P2.5 retina
CTAATAAACG
(
4
)
22.9
0.0229
P2.5 retina
ACTATTGCTT
(
3
)
1.8
0.0018
P4.5 retina
CTAATAAACG
(
4
)
37.6
0.0376
P4.5 retina
GAACCGATCA
(
4
)
4
0.004
P4.5 retina
ACTATTGCTT
(
3
)
2
0.002
P6.5 retina
CTAATAAACG
(
4
)
26.7
0.0267
P6.5 retina
GAACCGATCA
(
4
)
5
0.005
P6.5 retina
TAGGAATTTA
(
3
)
1.7
0.0017
P10.5 crx- retina
CTAATAAACG
(
4
)
5.6
0.0056
P10.5 crx- retina
GAACCGATCA
(
4
)
3.7
0.0037
P10.5 crx- retina
ATACTGAGAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
CTAATAAACG
(
4
)
7.7
0.0077
P10.5 crx+ retina
ACTATTGCTT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GAACCGATCA
(
4
)
1.9
0.0019
Adult retinal
CTAATAAACG
(
4
)
3.7
0.0037
ONL
CTAATAAACG
(
4
)
5.7
0.0057
ONL
TTTGTGTTCT
(
3
)
3.8
0.0038
ONL
GAACCGATCA
(
4
)
1.9
0.0019
