Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291247	Arl1	ADP-ribosylation factor-like 1	10		104303
Gene Ontology	GTP binding | intracellular protein transport | small GTPase mediated signal transduction | transporter activity
Human Homolog	ARL1[ADP-ribosylation factor-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGCTGGAAA (3) 16.3 0.0163 P8 Cb GC AAAAGAAATA (4) 13.1 0.0131 P8 Cb GC GTGGAGGAAG (7) 4.9 0.0049 P8 Cb GC GAGAAGAAGG (11) 3.3 0.0033 P8 Cb GC TGAAGGTTTT 3.3 0.0033 P8 Cb GC ACACCCCTTC (4) 1.6 0.0016 P8 Cb GC CTGGGAACCT (8) 1.6 0.0016 Cb medulloblastoma AAAAGAAATA (4) 41.6 0.0416 Cb medulloblastoma GTGCTGGAAA (3) 20.8 0.0208 Cb medulloblastoma GAGAAGAAGG (11) 4.6 0.0046 Cb medulloblastoma GGTGGCTTTT (4) 2.3 0.0023 Cb medulloblastoma GGTGGGTTTT (6) 2.3 0.0023 Cb medulloblastoma TGAAGGTTTT 2.3 0.0023 P8 GC+1d culture AAAAGAAATA (4) 11.4 0.0114 P8 GC+1d culture GTGCTGGAAA (3) 11.4 0.0114 P8 GC+1d culture TGAAGGTTTT 3.4 0.0034 P8 GC+1d culture ACACCCCTTC (4) 2.3 0.0023 P8 GC+1d culture CTGGGAACCT (8) 1.1 0.0011 P8 GC+1d culture GGTGGGTTTT (6) 1.1 0.0011 P8 GC+SHH+1d culture GTGCTGGAAA (3) 16.4 0.0164 P8 GC+SHH+1d culture AAAAGAAATA (4) 10.5 0.0105 P8 GC+SHH+1d culture ACACCCCTTC (4) 3.5 0.0035 P8 GC+SHH+1d culture GGTGGGTTTT (6) 2.3 0.0023 P8 GC+SHH+1d culture GAGAAGAAGG (11) 1.2 0.0012 3T3 fibroblasts CTGGGAACCT (8) 17.5 0.0175 3T3 fibroblasts GTGCTGGAAA (3) 7 0.007 E15 cortex GTGCTGGAAA (3) 19.8 0.0198 P1 cortex GTGCTGGAAA (3) 13.6 0.0136 P1 cortex AAAAGAAATA (4) 4.5 0.0045 Hypothalamus AAAAGAAATA (4) 25.4 0.0254 Hypothalamus GTGCTGGAAA (3) 5.4 0.0054 Hypothalamus GGTGGGTTTT (6) 1.8 0.0018 E12.5 retina GTGCTGGAAA (3) 22.5 0.0225 E12.5 retina AAAAGAAATA (4) 5.6 0.0056 E12.5 retina GGTGGGTTTT (6) 3.8 0.0038 E12.5 retina AAAATAAATA (12) 1.9 0.0019 E12.5 retina ACACCCCTTC (4) 1.9 0.0019 E12.5 retina CTGGGAACCT (8) 1.9 0.0019 E12.5 retina TGTTAAGGTA (2) 1.9 0.0019 E12.5 retina TTTTTTGTAC (2) 1.9 0.0019 E14.5 retina AAAAGAAATA (4) 25.5 0.0255 E14.5 retina GTGCTGGAAA (3) 9.1 0.0091 E14.5 retina AAAATAAATA (12) 1.8 0.0018 E14.5 retina ACACCCCTTC (4) 1.8 0.0018 E16.5 retina AAAAGAAATA (4) 23.5 0.0235 E16.5 retina GTGCTGGAAA (3) 10.9 0.0109 E16.5 retina GGTGGCTTTT (4) 3.6 0.0036 E16.5 retina GGAGACAGAG (6) 1.8 0.0018 E16.5 retina TGAAGGTTTT 1.8 0.0018 E18.5 retina AAAAGAAATA (4) 27.3 0.0273 E18.5 retina GTGCTGGAAA (3) 12.7 0.0127 E18.5 retina AAAATAAATA (12) 1.8 0.0018 E18.5 retina GGTGGGTTTT (6) 1.8 0.0018 E18.5 retina TGAAGGTTTT 1.8 0.0018 P0.5 retina GTGCTGGAAA (3) 21.6 0.0216 P0.5 retina CTGGGAACCT (8) 3.9 0.0039 P0.5 retina AAAAGAAATA (4) 2 0.002 P0.5 retina ACACCCCTTC (4) 2 0.002 P2.5 retina AAAAGAAATA (4) 14.1 0.0141 P2.5 retina GTGCTGGAAA (3) 10.6 0.0106 P2.5 retina ACACCCCTTC (4) 1.8 0.0018 P2.5 retina CTGGGAACCT (8) 1.8 0.0018 P2.5 retina GGAGACAGAG (6) 1.8 0.0018 P2.5 retina GGTGGCTTTT (4) 1.8 0.0018 P2.5 retina GGTGGGTTTT (6) 1.8 0.0018 P2.5 retina TGTTAAGGTA (2) 1.8 0.0018 P4.5 retina AAAAGAAATA (4) 13.9 0.0139 P4.5 retina GTGCTGGAAA (3) 7.9 0.0079 P4.5 retina ACACCCCTTC (4) 2 0.002 P4.5 retina CTGGGAACCT (8) 2 0.002 P4.5 retina GGTGGCTTTT (4) 2 0.002 P6.5 retina AAAAGAAATA (4) 30 0.03 P6.5 retina GTGCTGGAAA (3) 5 0.005 P6.5 retina ACACCCCTTC (4) 3.3 0.0033 P6.5 retina AAAATAAATA (12) 1.7 0.0017 P6.5 retina CTGGGAACCT (8) 1.7 0.0017 P6.5 retina GGAGACAGAG (6) 1.7 0.0017 P10.5 crx- retina GTGCTGGAAA (3) 26 0.026 P10.5 crx- retina AAAAGAAATA (4) 3.7 0.0037 P10.5 crx- retina CTGGGAACCT (8) 3.7 0.0037 P10.5 crx- retina TGTTAAGGTA (2) 3.7 0.0037 P10.5 crx- retina ACACCCCTTC (4) 1.9 0.0019 P10.5 crx- retina TTTTTTGTAC (2) 1.9 0.0019 P10.5 crx+ retina GTGCTGGAAA (3) 11.5 0.0115 P10.5 crx+ retina AAAAGAAATA (4) 5.8 0.0058 P10.5 crx+ retina CTGGGAACCT (8) 5.8 0.0058 P10.5 crx+ retina ACACCCCTTC (4) 3.8 0.0038 P10.5 crx+ retina GGAGACAGAG (6) 1.9 0.0019 Adult retinal GTGCTGGAAA (3) 5.6 0.0056 Adult retinal GTGGAGGAAG (7) 1.9 0.0019 Adult retinal TTTTTTGTAC (2) 1.9 0.0019 ONL GTGCTGGAAA (3) 13.4 0.0134 ONL AAAAGAAATA (4) 11.5 0.0115 ONL AAAATAAATA (12) 3.8 0.0038 ONL TTTTTTGTAC (2) 3.8 0.0038 ONL CTGGGAACCT (8) 1.9 0.0019 ONL GAGAAGAAGG (11) 1.9 0.0019 ONL GGAGACAGAG (6) 1.9 0.0019 ONL TGAAGGTTTT 1.9 0.0019