Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29135	Snrpd2	small nuclear ribonucleoprotein D2	7		107686
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | ribonucleoprotein complex | small nucleolar ribonucleoprotein complex | spliceosome assembly | spliceosome complex
Human Homolog	SNRPD2[small nuclear ribonucleoprotein D2 polypeptide 16.5kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGCTGGAAA (3) 16.3 0.0163 P8 Cb GC GTGCTGGTAA (4) 6.5 0.0065 P8 Cb GC CTCCCTGCCC (8) 1.6 0.0016 Cb medulloblastoma GTGCTGGAAA (3) 20.8 0.0208 Cb medulloblastoma GTGCTGGTAA (4) 4.6 0.0046 Cb medulloblastoma CTCCCTGCCC (8) 2.3 0.0023 P8 GC+1d culture GTGCTGGAAA (3) 11.4 0.0114 P8 GC+1d culture CTCCCTGCCC (8) 8 0.008 P8 GC+1d culture GTGCTAGAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGCTGGAAA (3) 16.4 0.0164 P8 GC+SHH+1d culture CTCCCTGCCC (8) 9.4 0.0094 P8 GC+SHH+1d culture GTGCTGGTAA (4) 4.7 0.0047 P8 GC+SHH+1d culture GTGCTAGAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGCAGTGCC (4) 1.2 0.0012 3T3 fibroblasts CTCCCTGCCC (8) 7 0.007 3T3 fibroblasts GTGCTGGAAA (3) 7 0.007 E15 cortex CTCCCTGCCC (8) 19.8 0.0198 E15 cortex GTGCTGGAAA (3) 19.8 0.0198 P1 cortex GTGCTGGAAA (3) 13.6 0.0136 P1 cortex CTCCCTGCCC (8) 9.1 0.0091 Hypothalamus GTGCTGGAAA (3) 5.4 0.0054 Hypothalamus GTGCTGGTAA (4) 3.6 0.0036 Hypothalamus GTGTAGGTTT 1.8 0.0018 E12.5 retina GTGCTGGAAA (3) 22.5 0.0225 E12.5 retina CTCCCTGCCC (8) 9.4 0.0094 E12.5 retina GTGCTGGTAA (4) 5.6 0.0056 E12.5 retina GTGCTAGAAA (2) 1.9 0.0019 E14.5 retina GTGCTGGAAA (3) 9.1 0.0091 E14.5 retina GTGCTAGAAA (2) 3.6 0.0036 E14.5 retina GTGCTGGTAA (4) 3.6 0.0036 E14.5 retina TTGCAGTGCC (4) 3.6 0.0036 E14.5 retina GTGTAGGTTT 1.8 0.0018 E16.5 retina GTGCTGGTAA (4) 12.7 0.0127 E16.5 retina GTGCTGGAAA (3) 10.9 0.0109 E16.5 retina TTGCAGTGCC (4) 7.2 0.0072 E16.5 retina CTCCCTGCCC (8) 3.6 0.0036 E16.5 retina AGTCTCCTCA (2) 1.8 0.0018 E16.5 retina GTGCTAGAAA (2) 1.8 0.0018 E16.5 retina GTGCTGGGAA (3) 1.8 0.0018 E16.5 retina GTGTAGGTTT 1.8 0.0018 E18.5 retina GTGCTGGAAA (3) 12.7 0.0127 E18.5 retina CTCCCTGCCC (8) 5.5 0.0055 E18.5 retina GTGCTGGTAA (4) 3.6 0.0036 E18.5 retina AGTCTCCTCA (2) 1.8 0.0018 E18.5 retina GTGTAGGTTT 1.8 0.0018 E18.5 retina TTGCAGTGCC (4) 1.8 0.0018 P0.5 retina GTGCTGGAAA (3) 21.6 0.0216 P0.5 retina CTCCCTGCCC (8) 7.9 0.0079 P0.5 retina TTGCAGTGCC (4) 3.9 0.0039 P0.5 retina GTGCTGGTAA (4) 2 0.002 P2.5 retina GTGCTGGAAA (3) 10.6 0.0106 P2.5 retina CTCCCTGCCC (8) 7 0.007 P2.5 retina GTGCTGGTAA (4) 5.3 0.0053 P4.5 retina GTGCTGGAAA (3) 7.9 0.0079 P4.5 retina CTCCCTGCCC (8) 5.9 0.0059 P4.5 retina GTGCTAGAAA (2) 2 0.002 P6.5 retina CTCCCTGCCC (8) 8.3 0.0083 P6.5 retina GTGCTGGAAA (3) 5 0.005 P6.5 retina GTGCTGGTAA (4) 5 0.005 P6.5 retina GTGCTAGAAA (2) 1.7 0.0017 P6.5 retina GTGCTGGGAA (3) 1.7 0.0017 P10.5 crx- retina GTGCTGGAAA (3) 26 0.026 P10.5 crx- retina GTGCTAGAAA (2) 5.6 0.0056 P10.5 crx- retina CTCCCTGCCC (8) 3.7 0.0037 P10.5 crx- retina AGTCTCCTCA (2) 1.9 0.0019 P10.5 crx- retina GTGCTGGTAA (4) 1.9 0.0019 P10.5 crx+ retina GTGCTGGAAA (3) 11.5 0.0115 P10.5 crx+ retina GTGCTGGTAA (4) 5.8 0.0058 P10.5 crx+ retina CTCCCTGCCC (8) 1.9 0.0019 P10.5 crx+ retina GTGCTAGAAA (2) 1.9 0.0019 Adult retinal GTGCTGGAAA (3) 5.6 0.0056 Adult retinal CTCCCTGCCC (8) 3.7 0.0037 Adult retinal TTGCAGTGCC (4) 1.9 0.0019 ONL GTGCTGGAAA (3) 13.4 0.0134 ONL CTCCCTGCCC (8) 1.9 0.0019 ONL GTGCTAGAAA (2) 1.9 0.0019 ONL GTGCTGGGAA (3) 1.9 0.0019