Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29151	Herpud1	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	8		64209
Gene Ontology	endoplasmic reticulum | endoplasmic reticulum membrane | integral to membrane | response to stress | response to unfolded protein
Human Homolog	HERPUD1[homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACTTTGTA GAGCCCGCCC (2) GGGGGCCCCC TTAGCAGGAC TTGCTGCAGA (3) TTTGCACCTT (2) 21.3 0.0213 Cb medulloblastoma AAACTTTGTA GAGCCCGCCC (2) GTCCCAGGAC TTAGCAGGAC 27.7 0.0277 P8 GC+1d culture AAACTTTGTA GGGGGCCCCC GTCCCAGGAC TTAGCAGGAC TTTGCACCTT (2) 20.6 0.0206 P8 GC+SHH+1d culture AAACTTTGTA GGGGGCCCCC GTCCCAGGAC TTAGCAGGAC TTTGCACCTT (2) 17.5 0.0175 3T3 fibroblasts GTCCCAGGAC TTAGCAGGAC 10.5 0.0105 E15 cortex GTCCCAGGAC 4.9 0.0049 P1 cortex AAACTTTGTA GTCCCAGGAC 9 0.009 Hypothalamus GGGGGCCCCC GTCCCAGGAC TTAGCAGGAC TTTGCACCTT (2) 18 0.018 E12.5 retina GTCCCAGGAC TTAGCAGGAC TTTGCACCTT (2) 16.9 0.0169 E14.5 retina AAACTTTGTA TTAGCAGGAC 9.1 0.0091 E16.5 retina AAACTTTGTA GTCCCAGGAC TTAGCAGGAC 12.7 0.0127 E18.5 retina AAACTTTGTA GGGGGCCCCC TTAGCAGGAC 20 0.02 P0.5 retina AAACTTTGTA GTCCCAGGAC TTAGCAGGAC TTTGCACCTT (2) 11.8 0.0118 P2.5 retina AAACTTTGTA GGGGGCCCCC TTAGCAGGAC TTGCTGCAGA (3) 12.4 0.0124 P4.5 retina AAACTTTGTA GAGCCCGCCC (2) GGGGGCCCCC TTAGCAGGAC TTTGCACCTT (2) 17.9 0.0179 P6.5 retina AAACTTTGTA GTCCCAGGAC TTAGCAGGAC 11.6 0.0116 P10.5 crx- retina AAACTTTGTA GAGCCCGCCC (2) GTCCCAGGAC TTAGCAGGAC TTTGCACCTT (2) 22.3 0.0223 P10.5 crx+ retina AAACTTTGTA GAGCCCGCCC (2) GTCCCAGGAC TTAGCAGGAC TTGCTGCAGA (3) 17.3 0.0173 Adult retinal AAACTTTGTA GAGCCCGCCC (2) GGGGGCCCCC GTCCCAGGAC TTAGCAGGAC 22.4 0.0224 ONL AAACTTTGTA TTAGCAGGAC TTTGCACCTT (2) 9.5 0.0095