| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTGCATTAT (4) GGTGTTAATG (3)
| 3.2 | 0.0032 |
| Cb medulloblastoma | GGTGTTAATG (3)
| 4.6 | 0.0046 |
| P8 GC+1d culture | AGAGCATTAA (3) ATTGCATTAT (4) GGTGTTAATG (3) TTTATTATTT (4)
| 8 | 0.008 |
| P8 GC+SHH+1d culture | AGAGCATTAA (3) GGTGTTAATG (3) TCAGCTGTGG (3) TTTATTATTT (4)
| 5.9 | 0.0059 |
| P1 cortex | ATTGCATTAT (4) GGTGTTAATG (3) TTTATTATTT (4)
| 18.1 | 0.0181 |
| Hypothalamus | TTTATTATTT (4)
| 7.2 | 0.0072 |
| E12.5 retina | AGAGCATTAA (3) GGTGTTAATG (3) TCAGCTGTGG (3)
| 13.2 | 0.0132 |
| E14.5 retina | GGTGTTAATG (3) TTTATTATTT (4)
| 5.4 | 0.0054 |
| E16.5 retina | TTTATTATTT (4)
| 1.8 | 0.0018 |
| E18.5 retina | AAAACAGTTA (4) AGAGCATTAA (3) TTTATTATTT (4)
| 7.2 | 0.0072 |
| P0.5 retina | AAAACAGTTA (4) GGTGTTAATG (3)
| 5.9 | 0.0059 |
| P2.5 retina | TTTATTATTT (4)
| 12.3 | 0.0123 |
| P4.5 retina | TTTATTATTT (4)
| 5.9 | 0.0059 |
| P6.5 retina | ATTGCATTAT (4) GGTGTTAATG (3) TTTATTATTT (4)
| 6.7 | 0.0067 |
| P10.5 crx- retina | GGTGTTAATG (3) TCAGCTGTGG (3)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GGTGTTAATG (3) TCAGCTGTGG (3) TTTATTATTT (4)
| 5.7 | 0.0057 |
| Adult retinal | TTTATTATTT (4)
| 1.9 | 0.0019 |
| ONL | AAAACAGTTA (4) GGTGTTAATG (3) TTTATTATTT (4)
| 7.6 | 0.0076 |