Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291554	Prkci	protein kinase C, iota	3	3 A3 (3 13.8 cM)	18759
Gene Ontology	apical part of cell | ATP binding | diacylglycerol binding | intracellular signaling cascade | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PRKCI[protein kinase C, iota]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGAAGTGTG (4) 6.5 0.0065 P8 Cb GC TAGAACACTG 3.3 0.0033 P8 Cb GC GGTTCAGGAA (4) 1.6 0.0016 P8 Cb GC GTCACAAACT (2) 1.6 0.0016 Cb medulloblastoma TTGAAGTGTG (4) 11.6 0.0116 Cb medulloblastoma TAGAACACTG 4.6 0.0046 Cb medulloblastoma AAAAAAATTA (6) 2.3 0.0023 P8 GC+1d culture CATTTGTCAA (2) 4.6 0.0046 P8 GC+1d culture TACAGTGTCT (3) 4.6 0.0046 P8 GC+1d culture TAGAACACTG 2.3 0.0023 P8 GC+1d culture TTGAAGTGTG (4) 2.3 0.0023 P8 GC+1d culture AAAAAAATTA (6) 1.1 0.0011 P8 GC+1d culture GCACTTAAGG (2) 1.1 0.0011 P8 GC+1d culture GGTTCAGGAA (4) 1.1 0.0011 P8 GC+1d culture GTCACAAACT (2) 1.1 0.0011 P8 GC+SHH+1d culture TAGAACACTG 4.7 0.0047 P8 GC+SHH+1d culture TTGAAGTGTG (4) 4.7 0.0047 P8 GC+SHH+1d culture GTCACAAACT (2) 2.3 0.0023 P8 GC+SHH+1d culture TACAGTGTCT (3) 2.3 0.0023 3T3 fibroblasts TAGAACACTG 3.5 0.0035 3T3 fibroblasts TTGAAGTGTG (4) 3.5 0.0035 E15 cortex GGTTCAGGAA (4) 4.9 0.0049 E15 cortex TAGAACACTG 4.9 0.0049 P1 cortex AAAAAAATTA (6) 4.5 0.0045 Hypothalamus GGTTCAGGAA (4) 1.8 0.0018 Hypothalamus TAGAACACTG 1.8 0.0018 E12.5 retina TAGAACACTG 5.6 0.0056 E14.5 retina TAGAACACTG 3.6 0.0036 E14.5 retina AAAAAAATTA (6) 1.8 0.0018 E14.5 retina TTGAAGTGTG (4) 1.8 0.0018 E16.5 retina TAGAACACTG 1.8 0.0018 E16.5 retina TGATACAGAG (5) 1.8 0.0018 E16.5 retina TTGAAGTGTG (4) 1.8 0.0018 E18.5 retina TAGAACACTG 20 0.02 E18.5 retina GCACTTAAGG (2) 1.8 0.0018 E18.5 retina TGATACAGAG (5) 1.8 0.0018 P0.5 retina GGTTCAGGAA (4) 2 0.002 P0.5 retina TACAGTGTCT (3) 2 0.002 P2.5 retina TAGAACACTG 14.1 0.0141 P2.5 retina TTGAAGTGTG (4) 7 0.007 P2.5 retina GCACTTAAGG (2) 3.5 0.0035 P2.5 retina AAAAAAATTA (6) 1.8 0.0018 P4.5 retina TAGAACACTG 7.9 0.0079 P4.5 retina TTGAAGTGTG (4) 5.9 0.0059 P4.5 retina GGTTCAGGAA (4) 2 0.002 P4.5 retina TACAGTGTCT (3) 2 0.002 P6.5 retina TAGAACACTG 3.3 0.0033 P6.5 retina GCACTTAAGG (2) 1.7 0.0017 P6.5 retina GGTTCAGGAA (4) 1.7 0.0017 P6.5 retina TGATACAGAG (5) 1.7 0.0017 P10.5 crx- retina TAGAACACTG 7.4 0.0074 P10.5 crx- retina GCACTTAAGG (2) 1.9 0.0019 P10.5 crx- retina GGTTCAGGAA (4) 1.9 0.0019 P10.5 crx+ retina GCACTTAAGG (2) 1.9 0.0019 P10.5 crx+ retina GTCACAAACT (2) 1.9 0.0019 P10.5 crx+ retina TAGAACACTG 1.9 0.0019 P10.5 crx+ retina TTGAAGTGTG (4) 1.9 0.0019 Adult retinal TAGAACACTG 3.7 0.0037 Adult retinal TTGAAGTGTG (4) 1.9 0.0019 ONL TGATACAGAG (5) 3.8 0.0038 ONL TTGAAGTGTG (4) 3.8 0.0038 ONL GTCACAAACT (2) 1.9 0.0019