| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATGAAAAAA (2) AATGAGTTTC
| 8.2 | 0.0082 |
| Cb medulloblastoma | AATGAAAAAA (2)
| 2.3 | 0.0023 |
| P8 GC+1d culture | AATGAAAAAA (2) AATGAGTTTC CCAGCCTTTA (2) TTGATGTCCA
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | AATGAAAAAA (2) AATGAGTTTC CCAGCCTTTA (2) CCAGTCTTTA
| 12.8 | 0.0128 |
| 3T3 fibroblasts | CCAGCCTTTA (2) CTGAGCAAGG (2) GGGTCTCTCA
| 31.5 | 0.0315 |
| E15 cortex | AATCCTGAGA AATGAAAAAA (2) CCAGCCTTTA (2) GGGTCTCTCA
| 19.6 | 0.0196 |
| Hypothalamus | AATCCTGAGA CTGAGCAAGG (2)
| 3.6 | 0.0036 |
| E12.5 retina | AATGAGTTTC CCAGCCTTTA (2)
| 11.3 | 0.0113 |
| E14.5 retina | AATGAAAAAA (2) AATGAGTTTC CCAGCCTTTA (2) CTGAGCAAGG (2)
| 23.7 | 0.0237 |
| E16.5 retina | AATGAAAAAA (2) AATGAGTTTC CCAGCCTTTA (2) CTGAGCAAGG (2)
| 23.5 | 0.0235 |
| E18.5 retina | AATGAAAAAA (2) AATGAGTTTC
| 38.2 | 0.0382 |
| P0.5 retina | AATCCTGAGA AATGAAAAAA (2) AATGAGTTTC CCAGCCTTTA (2)
| 9.9 | 0.0099 |
| P2.5 retina | AATGAAAAAA (2) AATGAGTTTC CCAGCCTTTA (2) GGGTCTCTCA TTGATGTCCA
| 24.7 | 0.0247 |
| P4.5 retina | AATCCTGAGA AATGAAAAAA (2) AATGAGTTTC GGGTCTCTCA
| 15.9 | 0.0159 |
| P6.5 retina | AATGAGTTTC CCAGCCTTTA (2) GGGTCTCTCA TTGATGTCCA
| 10 | 0.01 |
| ONL | AATGAAAAAA (2) CCAGCCTTTA (2)
| 3.8 | 0.0038 |