Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291901
AA408420
expressed sequence AA408420
11
103542
Mm.291901
X83328
EST X83328
11
11 E1 (11 70.0 cM)
13929
Human Homolog
LOC51321[hypothetical protein LOC51321]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 10 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGACAACTG
(
7
)
9.8
0.0098
P8 Cb GC
TACTACTGCA (
3
)
1.6
0.0016
P8 Cb GC
TATTTAATGT (
7
)
1.6
0.0016
P8 Cb GC
TGCCTGCACA
(
5
)
1.6
0.0016
P8 Cb GC
TTGGAAATCT (
9
)
1.6
0.0016
Cb medulloblastoma
GTGACAACTG
(
7
)
6.9
0.0069
Cb medulloblastoma
CGCATTTGCC
(
2
)
2.3
0.0023
Cb medulloblastoma
CTTGTAATAA (
3
)
2.3
0.0023
P8 GC+1d culture
GTGACAACTG
(
7
)
12.6
0.0126
P8 GC+1d culture
CGCATTTGCC
(
2
)
2.3
0.0023
P8 GC+1d culture
TAAGCACAGG
(
5
)
2.3
0.0023
P8 GC+1d culture
CTTGAATAAG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGACAACTG
(
7
)
19.9
0.0199
P8 GC+SHH+1d culture
CGCATTTGCC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TGACGCTCTG (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCCTGCACA
(
5
)
1.2
0.0012
3T3 fibroblasts
CCCTGGGTTG (
5
)
3.5
0.0035
E15 cortex
GTGACAACTG
(
7
)
9.9
0.0099
E15 cortex
AGTGTGTGTG (
14
)
4.9
0.0049
P1 cortex
CTTGTAATAA (
3
)
9.1
0.0091
P1 cortex
GTGACAACTG
(
7
)
9.1
0.0091
P1 cortex
TAAGCACAGG
(
5
)
4.5
0.0045
P1 cortex
TATTTAATGT (
7
)
4.5
0.0045
Hypothalamus
CTTGTAATAA (
3
)
1.8
0.0018
Hypothalamus
GTGACAACTG
(
7
)
1.8
0.0018
Hypothalamus
TGACGCTCTG (
10
)
1.8
0.0018
Hypothalamus
TGCCTGCACA
(
5
)
1.8
0.0018
Hypothalamus
TTGGAAATCT (
9
)
1.8
0.0018
E12.5 retina
GTGACAACTG
(
7
)
7.5
0.0075
E12.5 retina
CGCATTTGCC
(
2
)
1.9
0.0019
E12.5 retina
TACTACTGCA (
3
)
1.9
0.0019
E12.5 retina
TTGGAAATCT (
9
)
1.9
0.0019
E14.5 retina
GTGACAACTG
(
7
)
25.5
0.0255
E14.5 retina
AGTGTGTGTG (
14
)
1.8
0.0018
E14.5 retina
TATTTAATGT (
7
)
1.8
0.0018
E16.5 retina
GTGACAACTG
(
7
)
18.1
0.0181
E16.5 retina
CTTGAATAAG
(
2
)
3.6
0.0036
E16.5 retina
AGTGTGTGTG (
14
)
1.8
0.0018
E16.5 retina
TAAGCACAGG
(
5
)
1.8
0.0018
E16.5 retina
TTGGAAATCT (
9
)
1.8
0.0018
E18.5 retina
GTGACAACTG
(
7
)
30.9
0.0309
E18.5 retina
CCTGTGATTT (
4
)
1.8
0.0018
E18.5 retina
TTGGAAATCT (
9
)
1.8
0.0018
P0.5 retina
GTGACAACTG
(
7
)
5.9
0.0059
P0.5 retina
TAAGCACAGG
(
5
)
5.9
0.0059
P0.5 retina
TGTGGAGGTC
(
4
)
3.9
0.0039
P0.5 retina
CCCTGGGTTG (
5
)
2
0.002
P0.5 retina
CTTGAATAAG
(
2
)
2
0.002
P2.5 retina
GTGACAACTG
(
7
)
15.8
0.0158
P2.5 retina
CTTGTAATAA (
3
)
1.8
0.0018
P2.5 retina
TAAGCACAGG
(
5
)
1.8
0.0018
P4.5 retina
GTGACAACTG
(
7
)
19.8
0.0198
P4.5 retina
CGCATTTGCC
(
2
)
2
0.002
P4.5 retina
TATTTAATGT (
7
)
2
0.002
P6.5 retina
GTGACAACTG
(
7
)
8.3
0.0083
P6.5 retina
TGTGGAGGTC
(
4
)
1.7
0.0017
P6.5 retina
TTGGAAATCT (
9
)
1.7
0.0017
P10.5 crx- retina
GTGACAACTG
(
7
)
3.7
0.0037
P10.5 crx- retina
TTGGAAATCT (
9
)
1.9
0.0019
P10.5 crx+ retina
GTGACAACTG
(
7
)
13.5
0.0135
P10.5 crx+ retina
CCTGTGATTT (
4
)
3.8
0.0038
P10.5 crx+ retina
CGCATTTGCC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAAGCACAGG
(
5
)
1.9
0.0019
P10.5 crx+ retina
TACTACTGCA (
3
)
1.9
0.0019
P10.5 crx+ retina
TATTTAATGT (
7
)
1.9
0.0019
Adult retinal
CCCTGGGTTG (
5
)
3.7
0.0037
Adult retinal
GTGACAACTG
(
7
)
3.7
0.0037
Adult retinal
CGCATTTGCC
(
2
)
1.9
0.0019
Adult retinal
TAAGCACAGG
(
5
)
1.9
0.0019
Adult retinal
TGCCTGCACA
(
5
)
1.9
0.0019
ONL
GTGACAACTG
(
7
)
13.4
0.0134
ONL
AGTGTGTGTG (
14
)
5.7
0.0057
ONL
TGTGGAGGTC
(
4
)
3.8
0.0038
ONL
TAAGCACAGG
(
5
)
1.9
0.0019
ONL
TGCCTGCACA
(
5
)
1.9
0.0019
